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Pyrobaculum aerophilum str. IM2 (paer1)
Gene : AAL64469.1
DDBJ      :             short chain dehydrogenase
Swiss-Prot:             

Homologs  Archaea  51/68 : Bacteria  873/915 : Eukaryota  191/199 : Viruses  0/175   --->[See Alignment]
c.2.1
:245 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   5->241 2uvdA PDBj 2e-30 36.5 %
:RPS:PDB   3->241 1dohB PDBj 2e-36 27.6 %
:RPS:SCOP  3->238 1pwxA  c.2.1.2 * 6e-41 21.8 %
:HMM:SCOP  1->238 1zemA1 c.2.1.2 * 5.5e-70 41.5 %
:RPS:PFM   5->165 PF00106 * adh_short 5e-11 33.5 %
:HMM:PFM   3->166 PF00106 * adh_short 4.4e-34 25.2 163/167  
:BLT:SWISS 5->243 FABL_BACSU 6e-30 35.3 %
:PROS 135->163|PS00061|ADH_SHORT
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAL64469.1 GT:GENE AAL64469.1 GT:PRODUCT short chain dehydrogenase GT:DATABASE GIB00076CH01 GT:ORG paer1 GB:ACCESSION GIB00076CH01 GB:LOCATION complement(1674320..1675057) GB:FROM 1674320 GB:TO 1675057 GB:DIRECTION - GB:PRODUCT short chain dehydrogenase GB:NOTE Unclassified GB:PROTEIN_ID AAL64469.1 GB:DB_XREF GI:18161167 LENGTH 245 SQ:AASEQ MPTVVVTGSGRGIGRAIAVRFAREGWNVVVNAKKGKEEAEETLRMVREAGGNGVVVLADVATREGCRNVVQAAVQNFGGLDVLVNNAGLGLYSLFLNADDRLIDKQLEVSLKSVIYCSQEAAKVMKEGSIINIASIAGIRPFVGLSIYSAAKAAIINLTQALAVELAPRIRVNAVAPGVVKTKMGDSLMKLLGVTEEEFSKNHTLLGKIVAPEDVAEAVWMLVKIPTITGQVIVVDSGQLLKIYS GT:EXON 1|1-245:0| BL:SWS:NREP 1 BL:SWS:REP 5->243|FABL_BACSU|6e-30|35.3|235/250| PROS 135->163|PS00061|ADH_SHORT|PDOC00060| SEG 128->139|gsiiniasiagi| BL:PDB:NREP 1 BL:PDB:REP 5->241|2uvdA|2e-30|36.5|230/246| RP:PDB:NREP 1 RP:PDB:REP 3->241|1dohB|2e-36|27.6|239/271| RP:PFM:NREP 1 RP:PFM:REP 5->165|PF00106|5e-11|33.5|161/169|adh_short| HM:PFM:NREP 1 HM:PFM:REP 3->166|PF00106|4.4e-34|25.2|163/167|adh_short| GO:PFM:NREP 2 GO:PFM GO:0008152|"GO:metabolic process"|PF00106|IPR002198| GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF00106|IPR002198| RP:SCP:NREP 1 RP:SCP:REP 3->238|1pwxA|6e-41|21.8|229/252|c.2.1.2| HM:SCP:REP 1->238|1zemA1|5.5e-70|41.5|236/0|c.2.1.2|1/1|NAD(P)-binding Rossmann-fold domains| OP:NHOMO 11322 OP:NHOMOORG 1115 OP:PATTERN 2211235976867666-825322182283457-1---------11132--622-13--2-22643135 GDY3Q1-3557331fiVIJ-Ij22W*IHIIIOhs*uRq**6S6wHB853872KDA93911AAQ2FEJPQKA1111111-166R21533448624111--74P3C8xBS9H1111111111111147749C5449A6CAADG222D9DDEC6556522211332362BHBT5121112123113D9556771E7LFFFFFFFIFGHGFGFKENNGNEED9HIMGID999998Ja744444334444443B998B41A1671512179556764568A555545322233333333333333454455555445321111211134357B55544445478455257543311672229712332433335352382FVEEL12111J6tST248NGIJHCDEDBCDCEDS-FEHDDXFLOgQ1vYYJdWWqrrebJT9HBFCKD6DFB7777777777BKIB56C91122122211-1223212211211211117AVkF5ALGATjafcjdGHGHGWWoeIIII7GpQwMrcX38KJHD7ABAMDQ7SL6C82757741121111227KB55N4B31121-333224974A42653645IQ2322232333333242222222323227779869DB9F97455556A76664B4776681-1323511-11198BF5G4BDDABABADC-DABCCABBBCD9BAABBABHOJ935688446666666766666KAA8998C1187777776777711172211-AAAB3BGHB111527111112242EFHGG4E597K7MMLKHLTYMEILLFJHN5343343332455C5455468757BCA9A8856733332234875466--------1-3----2---1-1------1-------43331566662C2 11--EBC-311-499QTMLQMOLbUXTAB46578B89LEI9IJ886LLKPQahkHGFECEAB35B6422823578222123677B94B-DfCTAQAA97875AFF9-BE7*GOFDE4422-2D4EA2E3NgF-CAA3323C44B825324A12C6CBAHgiU9TOFABFGODUCE4973i1227KGNRoJgHC8I7877 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 245 STR:RPRED 100.0 SQ:SECSTR TEEEEETTTTcHHHHHHHHHHHHTTcEEEEEEcccHHHHHHHHHHHHHTTccEEEEEccTTcHHHHHHHHHHHHHHHccccEEEEcccccccccGGGccHHHHHHHHHHHTHHHHHHHHHHHHHccTEEEEEccGGGTcccccccHHHHHHHHHHHHHHHHHHHHHGGGcEEEEEEEcccccHHHHHHGccHHHHHHHHHHHccTTcccccHHHHHHHHHHHHcGTTccccEEEEcccccccccT PSIPRED ccEEEEEccccHHHHHHHHHHHHcccEEEEEEcccHHHHHHHHHHHHHcccEEEEEEcccccHHHHHHHHHHHHHHHccccEEEEcccccccccHHHccHHHHHHHHHHHcHHHHHHHHHHHHHHccccEEEEEEHHHcccccccHHHHHHHHHHHHHHHHHHHHHccccEEEEEccccccccHHHHHHHHccHHHHHHHHHcccccccccHHHHHHHHHHHHccccccccEEEEcccEEEEEEc //