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Pyrobaculum aerophilum str. IM2 (paer1)
Gene : AAL64582.1
DDBJ      :             sua5 family protein
Swiss-Prot:             

Homologs  Archaea  67/68 : Bacteria  805/915 : Eukaryota  156/199 : Viruses  0/175   --->[See Alignment]
d.115.1
:343 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   2->343 2eqaA PDBj 5e-80 53.3 %
:RPS:PDB   23->103 3c9dA PDBj 2e-08 9.9 %
:RPS:PDB   106->202 2e6gH PDBj 1e-19 12.4 %
:RPS:SCOP  4->207 1k7jA  d.115.1.1 * 2e-53 23.5 %
:HMM:SCOP  1->211 1jcuA_ d.115.1.1 * 3.8e-64 43.3 %
:RPS:PFM   21->196 PF01300 * Sua5_yciO_yrdC 1e-35 48.9 %
:RPS:PFM   199->331 PF03481 * SUA5 5e-19 47.7 %
:HMM:PFM   21->196 PF01300 * Sua5_yciO_yrdC 4.3e-56 43.8 176/179  
:HMM:PFM   198->331 PF03481 * SUA5 1.6e-34 38.1 134/152  
:BLT:SWISS 12->331 YWLC_BACSU 5e-63 43.8 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAL64582.1 GT:GENE AAL64582.1 GT:PRODUCT sua5 family protein GT:DATABASE GIB00076CH01 GT:ORG paer1 GB:ACCESSION GIB00076CH01 GB:LOCATION 1769921..1770952 GB:FROM 1769921 GB:TO 1770952 GB:DIRECTION + GB:PRODUCT sua5 family protein GB:NOTE Unclassified GB:PROTEIN_ID AAL64582.1 GB:DB_XREF GI:18161288 LENGTH 343 SQ:AASEQ MRLLRTDPTRPDPEVIKTAAEVLKNGGIVAAPTETVYGLFTHAYREDGCVKVFKAKGRPMDNPLIVHVDSVEMASEIAEIPEGIRGVLAQLWPGPVTIVVKSRGVVPRCVTAGLNTVAVRAPAHPIPLAIIKELNAPIAGPSANKAGRPSPTTATHILEDLGDEVDLIIDGGPTFFGVESTIIDVTRKPPALLRPGPFTVEELEKFFGEIQIPPVARGLAEAEVALAPGMKYKHYAPDTMLVIVHFDLAEAVKVLKARGLKVAVLCAAGKCADADASLHLGTDLYEVAKNLYKSLRDLDKLSVNIGIIPAVEERGIGLAIMNRIRKAAAHREAFSPEQLLKYI GT:EXON 1|1-343:0| BL:SWS:NREP 1 BL:SWS:REP 12->331|YWLC_BACSU|5e-63|43.8|315/346| BL:PDB:NREP 1 BL:PDB:REP 2->343|2eqaA|5e-80|53.3|319/327| RP:PDB:NREP 2 RP:PDB:REP 23->103|3c9dA|2e-08|9.9|81/208| RP:PDB:REP 106->202|2e6gH|1e-19|12.4|89/229| RP:PFM:NREP 2 RP:PFM:REP 21->196|PF01300|1e-35|48.9|176/178|Sua5_yciO_yrdC| RP:PFM:REP 199->331|PF03481|5e-19|47.7|130/146|SUA5| HM:PFM:NREP 2 HM:PFM:REP 21->196|PF01300|4.3e-56|43.8|176/179|Sua5_yciO_yrdC| HM:PFM:REP 198->331|PF03481|1.6e-34|38.1|134/152|SUA5| RP:SCP:NREP 1 RP:SCP:REP 4->207|1k7jA|2e-53|23.5|200/206|d.115.1.1| HM:SCP:REP 1->211|1jcuA_|3.8e-64|43.3|208/208|d.115.1.1|1/1|YrdC/RibB| OP:NHOMO 1326 OP:NHOMOORG 1028 OP:PATTERN 11111111111111111111111111111111111111111111111111111111111111111-11 2221111111111111111-1111111111111111121111111121111-11111-112212121112211111111111---111111212111--2222222221211111111111111111111111111111111111112312212212------11122211-------------1-111111111111111111111111111111111111111111111111222222122222211111111111111111111111111111111111111111111111111111111111111111111111-111111111111111111111111111111111111111111111111111111211111111111111111111111111111111111-11111111111111111121111111111111111111111111111111111111111111111111111111111-111111111111222222222222222222222222222222222-122211111211211222121231112222222222212222-111-1--1111111111122222222-------------------------22212-22221222111121111111111112--12212------22222212222222222-2222222222222222222222212222222222222222222222222221-222222212222--12222222222222111111121121211111111111-1-2222222222322222222---------11111333332223311111111111111--21111111131111111-1111----------------------1111111111111 1111111-211111121111111111111111111111111-111111111111111-1111111111-1111111111111111111-121111111111211111121632322------------------------1------1-----1121131221231111111112111-11111-12211-12121111 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 322 STR:RPRED 93.9 SQ:SECSTR #EEEEcccccccHHHHHHHHHHEcccEEEEccccccccGGGTTTcTTTcccTTcHHHHHHHHHHHTcHHHccTTcccTTHHHHHHHHHHTHHHHHHHHHHHHHTTEEEEccccTTcHHHHHHHHHHHHHHTTccEEEEcEEcccccccccEEEEEcccccTTcccEEEEEccHHccccHHHHHHHHHcccccEEEEEEEEccccGGGTTccc###################ccccccccEEEEEcGGGHHHHHHHHTTTccEEEEEGGTGGGTTcEEEEEEcTHHHHHHHHHHHHHHHHHccccEEEEEcccccTTHHHH#HHHHHHTTccEEccGGGGGGGc DISOP:02AL 221-223| PSIPRED cEEEEEEcccccHHHHHHHHHHHHcccEEEEEccccEEEEEccccHHHHHHHHHHHcccccccEEEEEccHHHHHHHHcccHHHHHHHHHcccccEEEEEcccccccHHHcccccEEEEEccccHHHHHHHHHccccEEEEEcccccccccccHHHHHHHHcccEEEEEEccccccccccEEEEEccccEEEEEcccccHHHHHHHcccEEccHHHcccccccccccccccHHccccccEEEEEcccHHHHHHHHHHcccEEEEEEcccccccccEEEEccccHHHHHHHHHHHHHHHHHccccEEEEEccccccccHHHHHHHHHHHcccHHccHHHHHHcc //