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Pyrobaculum aerophilum str. IM2 (paer1)
Gene : AAL64684.1
DDBJ      :             conserved hypothetical protein
Swiss-Prot:             

Homologs  Archaea  10/68 : Bacteria  197/915 : Eukaryota  2/199 : Viruses  0/175   --->[See Alignment]
a.4.5e.52.1
:293 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   24->149 2an1A PDBj 3e-13 36.0 %
:BLT:PDB   238->293 2znzC PDBj 6e-05 32.1 %
:RPS:PDB   35->223 2an1B PDBj 2e-08 27.5 %
:RPS:PDB   230->291 2dbbA PDBj 2e-09 17.7 %
:RPS:SCOP  26->221 1u0rA  e.52.1.1 * 1e-19 24.6 %
:RPS:SCOP  234->283 2d1hA1  a.4.5.50 * 2e-10 36.0 %
:HMM:SCOP  16->223 1suwA_ e.52.1.1 * 8.1e-30 30.4 %
:HMM:SCOP  231->293 2d1hA1 a.4.5.50 * 5.1e-11 36.5 %
:RPS:PFM   26->211 PF01513 * NAD_kinase 2e-08 31.2 %
:RPS:PFM   241->287 PF01047 * MarR 2e-05 44.7 %
:HMM:PFM   99->220 PF01513 * NAD_kinase 2.5e-23 35.5 121/285  
:HMM:PFM   240->278 PF01022 * HTH_5 6.7e-11 55.3 38/47  
:BLT:SWISS 24->149 PPNK_SODGM 1e-14 40.0 %
:BLT:SWISS 130->210 PPNK_RHOOB 8e-07 35.8 %
:BLT:SWISS 221->277 RS18_BART1 6e-05 38.6 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAL64684.1 GT:GENE AAL64684.1 GT:PRODUCT conserved hypothetical protein GT:DATABASE GIB00076CH01 GT:ORG paer1 GB:ACCESSION GIB00076CH01 GB:LOCATION complement(1853256..1854137) GB:FROM 1853256 GB:TO 1854137 GB:DIRECTION - GB:PRODUCT conserved hypothetical protein GB:NOTE Hypothetical; Conserved GB:PROTEIN_ID AAL64684.1 GB:DB_XREF GI:18161398 LENGTH 293 SQ:AASEQ MCFNEVSTDSPVLMEWLEKYGIPVREDAEVFAVYGRDRDILRALRESDKVVVGISPPGLDVKLAALDLRELPSLTSIKCRAVEIPRLRAESPHGHVVGVNEIAIFPEKSATFLKYSLYVDGTFLFNDLSDGVLIATPLGSTAYALSAGGPIVDVRSRVIVIVPVNSAMGRKPYVIPQESVVEIRDIKSRARPVAIGDGVVEIDAGGSVTIRAWGRAKLLVRERAIPSGAKMPASAQLIRKVLAERGPLTVAEISAVTKLSQRTVRNALKRLREMGLVKAMLDPTDPRRKIYTV GT:EXON 1|1-293:0| BL:SWS:NREP 3 BL:SWS:REP 24->149|PPNK_SODGM|1e-14|40.0|125/292| BL:SWS:REP 130->210|PPNK_RHOOB|8e-07|35.8|81/320| BL:SWS:REP 221->277|RS18_BART1|6e-05|38.6|57/82| SEG 150->164|pivdvrsrvivivpv| BL:PDB:NREP 2 BL:PDB:REP 24->149|2an1A|3e-13|36.0|125/275| BL:PDB:REP 238->293|2znzC|6e-05|32.1|56/144| RP:PDB:NREP 2 RP:PDB:REP 35->223|2an1B|2e-08|27.5|189/281| RP:PDB:REP 230->291|2dbbA|2e-09|17.7|62/146| RP:PFM:NREP 2 RP:PFM:REP 26->211|PF01513|2e-08|31.2|186/240|NAD_kinase| RP:PFM:REP 241->287|PF01047|2e-05|44.7|47/59|MarR| HM:PFM:NREP 2 HM:PFM:REP 99->220|PF01513|2.5e-23|35.5|121/285|NAD_kinase| HM:PFM:REP 240->278|PF01022|6.7e-11|55.3|38/47|HTH_5| GO:PFM:NREP 5 GO:PFM GO:0003951|"GO:NAD+ kinase activity"|PF01513|IPR002504| GO:PFM GO:0008152|"GO:metabolic process"|PF01513|IPR002504| GO:PFM GO:0003700|"GO:transcription factor activity"|PF01047|IPR000835| GO:PFM GO:0005622|"GO:intracellular"|PF01047|IPR000835| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF01047|IPR000835| RP:SCP:NREP 2 RP:SCP:REP 26->221|1u0rA|1e-19|24.6|195/281|e.52.1.1| RP:SCP:REP 234->283|2d1hA1|2e-10|36.0|50/102|a.4.5.50| HM:SCP:REP 16->223|1suwA_|8.1e-30|30.4|207/249|e.52.1.1|1/1|NAD kinase| HM:SCP:REP 231->293|2d1hA1|5.1e-11|36.5|63/0|a.4.5.50|1/1|"Winged helix" DNA-binding domain| OP:NHOMO 209 OP:NHOMOORG 209 OP:PATTERN ------1----------11--111---------------------1-------1------------11 -1------------------------------------------------------------------------------------------------------1-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1111111-1---------------------------------1---------------------------11111111111------------------------------------------------------------------------------------------------111111-----111111111-111-1--11--------------1--------------------------------------------------------------------------------11111-111-1111111-11111-11-1111---1--1-----11111111111111111-111111111111111111111111111-111111111111111111111111-111111111111111-----------11111111-11----11111111111---1-11111111111111111----------111------------------------------------------------------------------------------------ -------------------------------------------------------------------------------------------1--------------------------------------------------------------------------------------1-------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 288 STR:RPRED 98.3 SQ:SECSTR #####cccccccHHHHHHHccEEEEHHccEEcHHccHHHHHHHHHTTcccEEEEccccccccccccccTTHHHHHHHcEEEEEEEEEEEEEEETTEEEccEEEEEEccccccEEEEEEETTEEEEEEEEcEEEEEcTGGGGTHHHHTTcccccTTccEEEEEEEcccTTcccEEEETTccEEEEEEEccTTEEEEETTTEEccTTcEEEEHHHHHHHHHHHTTHHHHTccccHHHHHHHHHHHHcTTccHHHHHHHTTccHHHHHHHHHHHHHHTccccccccccTGGGTEEE DISOP:02AL 248-262| PSIPRED cccccccHHHHHHHHHHHHcccccccccEEEEEEcccHHHHHHHHHccccEEEEEccccccccccccHHHHHHHHHcccEEEEEEEEEEcccccEEEEEEEEEEccccccEEEEEEEEEccEEEEEEEccEEEEEccccHHHHHHHccccEEcccccEEEEEEcccccccccEEEccccEEEEEEEccccEEEEEEccEEEEccccEEEEEEcccEEEEEEEcccEEEEEEccccHHHHHHHccccccHHHHHHHHHcccccHHHHHHHHHHHcccEEEEcccccccHHHccc //