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Pyrobaculum aerophilum str. IM2 (paer1)
Gene : AAL64745.1
DDBJ      :             ATP-dependant helicase, probable
Swiss-Prot:             

Homologs  Archaea  2/68 : Bacteria  0/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.37.1c.52.1
:1275 amino acids
:PSIPRED
:DISOPRED
:BLT:PDB   376->497 1gl9C PDBj 3e-05 28.0 %
:BLT:PDB   908->983 1fuuB PDBj 5e-05 32.4 %
:RPS:PDB   427->526 2dxcH PDBj 2e-08 8.4 %
:RPS:PDB   907->998 1b47A PDBj 2e-05 11.5 %
:RPS:SCOP  32->160 1w36B3  c.52.1.24 * 2e-04 15.0 %
:RPS:SCOP  425->526 1gm5A3  c.37.1.19 * 7e-10 23.9 %
:RPS:SCOP  933->999 1wp9A2  c.37.1.19 * 5e-06 32.8 %
:HMM:SCOP  439->982 2bmfA2 c.37.1.14 * 2.4e-28 25.1 %
:HMM:SCOP  752->1236 1yksA2 c.37.1.14 * 6.9e-12 19.9 %
:RPS:PFM   436->498 PF00270 * DEAD 2e-04 47.3 %
:RPS:PFM   916->979 PF00271 * Helicase_C 7e-06 38.1 %
:RPS:PFM   1108->1174 PF05316 * VAR1 2e-04 36.7 %
:HMM:PFM   429->507 PF00270 * DEAD 7.9e-10 32.3 65/167  
:HMM:PFM   575->650 PF00270 * DEAD 1.2e-07 27.3 66/167  
:HMM:PFM   909->980 PF00271 * Helicase_C 2.3e-10 32.4 71/78  
:HMM:PFM   1070->1144 PF04513 * Baculo_PEP_C 0.00053 27.4 73/140  
:BLT:SWISS 441->504 RGYR_SULAC 2e-05 38.7 %
:BLT:SWISS 915->978 HELX_SULSO 2e-08 42.9 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAL64745.1 GT:GENE AAL64745.1 GT:PRODUCT ATP-dependant helicase, probable GT:DATABASE GIB00076CH01 GT:ORG paer1 GB:ACCESSION GIB00076CH01 GB:LOCATION complement(1907253..1911080) GB:FROM 1907253 GB:TO 1911080 GB:DIRECTION - GB:PRODUCT ATP-dependant helicase, probable GB:NOTE Unclassified GB:PROTEIN_ID AAL64745.1 GB:DB_XREF GI:18161463 LENGTH 1275 SQ:AASEQ MMAAREEARRIRSLLHCYHFKEDITEDAKKVLEAKSREHDELVARVVRIFRDIIGSECIEENPLVKRGVADAVLRCIDKIYVLEIKSYPFAEINEESYCQRGFTRSYIADFEQAVLYGEEIRRRFSSPEVIPVLVYRGIPVEGLENTPFFIFIDVETARKEGASTTTSAELAYKPGPECARCRNTDCPIREKMRSYIAQGTAQVRAASAEVAYQELFKTEWCLARHGTRCVKCGPLYIALSQTTLHRDNLPLTEEHIHYVINSQNASQIAEYLKAQKLLIEKSCYQYRIPLQKIQIDSSGRYVVAFQVTRNDYLIMLEYVSLLNSLRRRGVRIDVRKLLNGPERCYRTFHGEVARLIRNISALPGNRRTFEAYYLPIIIDHIGSRDIKVDQISNYFSRNLWNENWINKLVSNLFDEKGQPITNISGFQNEAIRKIAENITAWLEKSGRSPLIILTAPPGTGKTLVFLIVAIAVALHGFKAVIMYPSKKLALQQVQQIYYIVEGLNRHGANISLAVLDGDSKRCGRRPQGGVRALRCDGGRGSLEYQGGQYICRTNQAASQVSWFTDCEDDDALSSSIIVTNPYKLSSMLMRSADSAKKLANSLALLVIDEVHTMLEPKHLDFFTALLHRLYLLGDVKKYPAIILSSATVTSSGLPFADRIASDASGAPITFRSVGAVERTEPPDPRMVREFSESLANALLGERLVQEYAVEPIDYYSMLGSIQGSGSTVTVAKLTAPMVVFTNPAESPSGTVQEAVVSLMIASSARRKLSAEVLRNFSSVIFFDSKESLSEVEAYVRDRLVLKEGSPSDKTVTKPFVMNLINGNIASYGLNLVRNILNSGSLAELEDFSHLTLFCTSLAELNNAYGSAKRAYNSDSSVARGPQCYNMAIDATIDIISDIRNNGRNIQNRHTLLIHHADLSDNVRYSIEEKLERPGAWSVVLSTSTLELGVNLTGVGAVGQLGLPKLAENVIQRFGRGGRDKSVLYTALGILFAKHTGEDVALIDEDYAVARLFAFKRTPVLPRDESRIISIEQLIAYTTIRALGWFRNSNVINKVEKVVESSLQFLVSDANQANQLYHVISSRLQTMCSALQALGGSMQQVAHRLLRDIVNQINQYIDNIRNVLQNINNTCSLYENLSKIINIYATDPLKYSWELYFTLGNVLSQLDSLPDLSKCFINNDIRIYNIVRDYVRDALHVARELILQYFPRAPSYSGWRTREILLQLTFVPPMPDPRIIEYSLAHYTVESGGIRRRSRELREAYLKSAPLKTDRYETL GT:EXON 1|1-1275:0| BL:SWS:NREP 2 BL:SWS:REP 441->504|RGYR_SULAC|2e-05|38.7|62/1248| BL:SWS:REP 915->978|HELX_SULSO|2e-08|42.9|63/875| SEG 1->10|mmaareearr| SEG 592->606|sadsakklanslall| SEG 888->899|aidatidiisdi| BL:PDB:NREP 2 BL:PDB:REP 376->497|1gl9C|3e-05|28.0|107/1005| BL:PDB:REP 908->983|1fuuB|5e-05|32.4|74/369| RP:PDB:NREP 2 RP:PDB:REP 427->526|2dxcH|2e-08|8.4|95/156| RP:PDB:REP 907->998|1b47A|2e-05|11.5|87/304| RP:PFM:NREP 3 RP:PFM:REP 436->498|PF00270|2e-04|47.3|55/167|DEAD| RP:PFM:REP 916->979|PF00271|7e-06|38.1|63/76|Helicase_C| RP:PFM:REP 1108->1174|PF05316|2e-04|36.7|60/337|VAR1| HM:PFM:NREP 4 HM:PFM:REP 429->507|PF00270|7.9e-10|32.3|65/167|DEAD| HM:PFM:REP 575->650|PF00270|1.2e-07|27.3|66/167|DEAD| HM:PFM:REP 909->980|PF00271|2.3e-10|32.4|71/78|Helicase_C| HM:PFM:REP 1070->1144|PF04513|0.00053|27.4|73/140|Baculo_PEP_C| GO:PFM:NREP 9 GO:PFM GO:0003676|"GO:nucleic acid binding"|PF00270|IPR011545| GO:PFM GO:0005524|"GO:ATP binding"|PF00270|IPR011545| GO:PFM GO:0008026|"GO:ATP-dependent helicase activity"|PF00270|IPR011545| GO:PFM GO:0003676|"GO:nucleic acid binding"|PF00271|IPR001650| GO:PFM GO:0004386|"GO:helicase activity"|PF00271|IPR001650| GO:PFM GO:0005524|"GO:ATP binding"|PF00271|IPR001650| GO:PFM GO:0003735|"GO:structural constituent of ribosome"|PF05316|IPR007980| GO:PFM GO:0005761|"GO:mitochondrial ribosome"|PF05316|IPR007980| GO:PFM GO:0006412|"GO:translation"|PF05316|IPR007980| RP:SCP:NREP 3 RP:SCP:REP 32->160|1w36B3|2e-04|15.0|127/276|c.52.1.24| RP:SCP:REP 425->526|1gm5A3|7e-10|23.9|92/259|c.37.1.19| RP:SCP:REP 933->999|1wp9A2|5e-06|32.8|64/279|c.37.1.19| HM:SCP:REP 439->982|2bmfA2|2.4e-28|25.1|267/0|c.37.1.14|1/1|P-loop containing nucleoside triphosphate hydrolases| HM:SCP:REP 752->1236|1yksA2|6.9e-12|19.9|236/0|c.37.1.14|1/1|P-loop containing nucleoside triphosphate hydrolases| OP:NHOMO 2 OP:NHOMOORG 2 OP:PATTERN ------------1-----1------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-9, 1273-1275| PSIPRED ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHEEEEEccccccccccHHHHHHccHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEEccccccccccccEEEEEEEEHHHccccccccccEEEEcccccHHHcccccccHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEccEEEEEEccEEEcccccccHHHHEEEEccccHHHHHHHHHHHHHHHHHHHHHHcccHHHEEEcccccEEEEEEEEcccHHHHHHHHHHHHHHHHcccEEEHHHHcccHHHHHHHHHHHHHHHHHHHHcccccccEEHHHHHHHHHHHHccccccHHHHHHHHHHHccHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHcccccEEEEEcccccHHHHHHHHHHHHHHHHccccEEEccccccHHHHHHHHHHHHHHcccccccccHHHHccccHHHHHHHHHHHHHHHHHccHHHHHHHHHccccccccEEEEEcccccHHHHHHHcccEEEEcHHHHHHHHccccHHHHHHHHcccEEEEEEHHHHHccccHHHHHHHHHHHHHHHHHccccEEEEEEEEccccccHHHHHHHHcccccccEEEEEEEEEEcccHHHHHHHHHcccccHHHHccccHHHHHHccHHHHHHHHHHHcccccEEHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHcHHHHHHHHcccccHHcHHHHHHccHHHHHHHHHccHHHHHHHHHHHHHccccccccccccccEEEHHHHHHHHHHHHHHHHHHHccccEEEEEEccccHHHHHHHHHHHHHccccEEEEEccHHHHccccccccEEEEccccccHHHHHHHHcccccccccccEEEEEEEEcccHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHccccccEEHHHHHHHHHHHHHHHccccHHHHHHccccEEHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHEEHEEEEEccccccccEEEEEHHHEEEccccHHHHHHHHHHHHHHHccccccccccc //