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Pyrobaculum aerophilum str. IM2 (paer1)
Gene : AAL64748.1
DDBJ      :             C-5 cytosine-specific DNA methylase
Swiss-Prot:             

Homologs  Archaea  11/68 : Bacteria  145/915 : Eukaryota  3/199 : Viruses  1/175   --->[See Alignment]
a.263.1c.66.1
:463 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   6->151 1dctA PDBj 4e-18 40.6 %
:RPS:PDB   1->160,419->459 2c7rA PDBj 2e-20 26.2 %
:RPS:SCOP  1->195,418->458 10mhA  c.66.1.26 * 9e-28 27.9 %
:RPS:SCOP  283->361 2ex3B1  a.263.1.1 * 3e-19 22.2 %
:HMM:SCOP  2->456 1g55A_ c.66.1.26 * 1.8e-64 33.0 %
:RPS:PFM   6->159,418->454 PF00145 * DNA_methylase 4e-25 41.6 %
:HMM:PFM   4->454 PF00145 * DNA_methylase 9.5e-55 31.7 284/335  
:BLT:SWISS 5->151 MTF1_FUSNU 2e-21 46.5 %
:BLT:SWISS 418->458 MT51_METJA 8e-04 39.0 %
:PROS 82->94|PS00094|C5_MTASE_1
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAL64748.1 GT:GENE AAL64748.1 GT:PRODUCT C-5 cytosine-specific DNA methylase GT:DATABASE GIB00076CH01 GT:ORG paer1 GB:ACCESSION GIB00076CH01 GB:LOCATION complement(1913015..1914406) GB:FROM 1913015 GB:TO 1914406 GB:DIRECTION - GB:PRODUCT C-5 cytosine-specific DNA methylase GB:NOTE DNA metabolism; DNA replication, recombination, and repair GB:PROTEIN_ID AAL64748.1 GB:DB_XREF GI:18161467 LENGTH 463 SQ:AASEQ MKPFRVVSLFSGAGGLDLGFKMSGMYQIIFANDVNLYATTTYAKNFEMKLLKCGGLTEAEPNVVLSCDVEKVLFSPLAGEADVVVGGPPCQDFSIVRGPARVGITIKRGRLYAHFIRALAVLQPKAFVFENVPGLTSANGGLAYKTIIEDFARLNTRWEEVKEIMTQEKIGAGVKGYEIVFSDIVDFAAAGVPQKRERLIIIGIRRDLIRSAEQIWHARAVIDRALRKTVFAKFPLTPLEVFEGRRLDELQEEYREIMEKWRGVWEEVGTETALMWKQKVWDDLTFDAVQDYLRLNGVQRTDSEELDAAFREHEVVLKLLGYYNTPVSLLKLPDGTTDPPDDSTEVVERMKRIPPGENHEFVKGTKWEVKGRGISLIYRRLHPLIPAYTVVAYGGGGTHGYHYDRDRATLTLRERARLQTFPDLFLFYGSKTQIRAQIGEAVPPLAAMKIAETLARILADFYS GT:EXON 1|1-463:0| BL:SWS:NREP 2 BL:SWS:REP 5->151|MTF1_FUSNU|2e-21|46.5|129/344| BL:SWS:REP 418->458|MT51_METJA|8e-04|39.0|41/310| PROS 82->94|PS00094|C5_MTASE_1|PDOC00089| SEG 196->210|rerliiigirrdlir| SEG 333->344|pdgttdppddst| SEG 387->417|aytvvayggggthgyhydrdratltlrerar| BL:PDB:NREP 1 BL:PDB:REP 6->151|1dctA|4e-18|40.6|128/324| RP:PDB:NREP 1 RP:PDB:REP 1->160,419->459|2c7rA|2e-20|26.2|182/327| RP:PFM:NREP 1 RP:PFM:REP 6->159,418->454|PF00145|4e-25|41.6|174/302|DNA_methylase| HM:PFM:NREP 1 HM:PFM:REP 4->454|PF00145|9.5e-55|31.7|284/335|DNA_methylase| GO:PFM:NREP 2 GO:PFM GO:0003677|"GO:DNA binding"|PF00145|IPR001525| GO:PFM GO:0006306|"GO:DNA methylation"|PF00145|IPR001525| RP:SCP:NREP 2 RP:SCP:REP 1->195,418->458|10mhA|9e-28|27.9|195/328|c.66.1.26| RP:SCP:REP 283->361|2ex3B1|3e-19|22.2|72/162|a.263.1.1| HM:SCP:REP 2->456|1g55A_|1.8e-64|33.0|336/0|c.66.1.26|1/1|S-adenosyl-L-methionine-dependent methyltransferases| OP:NHOMO 223 OP:NHOMOORG 160 OP:PATTERN 221---1-----------1--11-------------------1---------11------------1- ----1---11----------------------1--------1--------------1-----1------1-1111111----1-------1-----------1--2---1---------------------1-1--------1-1-252-335----------21--2324---------1----------1-------12--2-1-3--1----2-11--21----1-1----------1--------------------------------------2-1---11--1--11111--1----1---------11--12-1---3--1-1-------1-11--1---2-2122----1-----------------2--------1----------1---------------------------------1---------14------1------------------------------1-----------------2--------------------21--------1-------------------------1---3311122----1-----1---2---2-----1----1---11--1-21----------11123122--------------------------------1--1--------------11-----11---2------------------------------------------------------------------------1-----11--11--1---------1-2-2------1--------------11-----------------1----------------------1--------------------------------------1-1-1-------------------- ------------------------------------------------------------------------------------------------------------1---------------------------------------------------------------------1-------------1------ ----------------------1-------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 222 STR:RPRED 47.9 SQ:SECSTR TTTcEEEEETcTTTHHHHHHHHTTccEEEEEccccHHHHHHHHHHHccccccEccTTTccGcccccccGGGccGGGccccccEEEEEcccTTTcTTccccccGGGcTTccTHHHHHHHHHHHcccEEEEEEEGGGGTTTTTHHHHHHHHHHHHTTcccEEEcGT###############cccccccccccccccc##############################################################################################################################################################################################################################HTTccTTccccccHHHHHHHHHHcccHHHHHHHHHHHHHHHH#### PSIPRED ccccEEEEEEccccHHHHHHHHcccccEEEEEcccHHHHHHHHHHcccccEEcccEEcccHHHHcccccHHccccccccccEEEEEccccccccccccccccccccccccHHHHHHHHHHHHcccEEEEEccHHHHcccccHHHHHHHHHHHHcccccccccccHHHHHHHccccccEEEEEEEEEHHHccccccccEEEEEEEEccccccccccccccccccccccccccccccccccccccccccccHHHHHHHccccccccccccccccccccccccccccccccccccHHcccccccccHHHHHHHHccccccccccccccccccccccccccccccccHHHHHHHHccccccccccccccccccccccccccccccccccccEEEEEEcccccEEEccccccccccHHHHHHHccccccEEEcccHHHHHHHHHccccHHHHHHHHHHHHHHHHHHcc //