[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Pyrobaculum aerophilum str. IM2 (paer1)
Gene : AAL64819.1
DDBJ      :             riboflavin synthase
Swiss-Prot:RISB_PYRAE   RecName: Full=6,7-dimethyl-8-ribityllumazine synthase;         Short=DMRL synthase;         Short=Lumazine synthase;         EC=2.5.1.9;AltName: Full=Riboflavin synthase beta chain;

Homologs  Archaea  56/68 : Bacteria  493/915 : Eukaryota  11/199 : Viruses  0/175   --->[See Alignment]
c.16.1
:150 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   2->103 1hqkA PDBj 2e-15 33.3 %
:RPS:PDB   2->106 1c2yA PDBj 2e-14 30.5 %
:RPS:SCOP  2->103 1c2yA  c.16.1.1 * 2e-21 31.4 %
:HMM:SCOP  2->139 1ejbA_ c.16.1.1 * 3.4e-36 39.4 %
:RPS:PFM   2->103 PF00885 * DMRL_synthase 2e-14 37.3 %
:HMM:PFM   2->136 PF00885 * DMRL_synthase 1.4e-39 38.1 134/144  
:BLT:SWISS 1->150 RISB_PYRAE 1e-69 100.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAL64819.1 GT:GENE AAL64819.1 GT:PRODUCT riboflavin synthase GT:DATABASE GIB00076CH01 GT:ORG paer1 GB:ACCESSION GIB00076CH01 GB:LOCATION 1974924..1975376 GB:FROM 1974924 GB:TO 1975376 GB:DIRECTION + GB:PRODUCT riboflavin synthase GB:NOTE Biosynthesis of cofactors, prosthetic groups, and carriers; Riboflavin, FMN, and FAD GB:PROTEIN_ID AAL64819.1 GB:DB_XREF GI:18161544 LENGTH 150 SQ:AASEQ MVRLAIVVAEFNYDITQLMLQKAVEHAKFLGAEITYIVKTPGVYDIPMILKELVAKEEVDAVATLGAVIQGATKHDELVATQAARKILDIAVESGKPITLGIIGHGANRIQALERVEEYARRAVEAAVKMARRKKALREAKYNGSTVYID GT:EXON 1|1-150:0| SW:ID RISB_PYRAE SW:DE RecName: Full=6,7-dimethyl-8-ribityllumazine synthase; Short=DMRL synthase; Short=Lumazine synthase; EC=2.5.1.9;AltName: Full=Riboflavin synthase beta chain; SW:GN Name=ribH; OrderedLocusNames=PAE3296; SW:KW Complete proteome; Riboflavin biosynthesis; Transferase. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->150|RISB_PYRAE|1e-69|100.0|150/150| GO:SWS:NREP 2 GO:SWS GO:0009231|"GO:riboflavin biosynthetic process"|Riboflavin biosynthesis| GO:SWS GO:0016740|"GO:transferase activity"|Transferase| SEG 114->128|erveeyarraveaav| BL:PDB:NREP 1 BL:PDB:REP 2->103|1hqkA|2e-15|33.3|102/154| RP:PDB:NREP 1 RP:PDB:REP 2->106|1c2yA|2e-14|30.5|105/155| RP:PFM:NREP 1 RP:PFM:REP 2->103|PF00885|2e-14|37.3|102/143|DMRL_synthase| HM:PFM:NREP 1 HM:PFM:REP 2->136|PF00885|1.4e-39|38.1|134/144|DMRL_synthase| GO:PFM:NREP 2 GO:PFM GO:0009231|"GO:riboflavin biosynthetic process"|PF00885|IPR002180| GO:PFM GO:0009349|"GO:riboflavin synthase complex"|PF00885|IPR002180| RP:SCP:NREP 1 RP:SCP:REP 2->103|1c2yA|2e-21|31.4|102/155|c.16.1.1| HM:SCP:REP 2->139|1ejbA_|3.4e-36|39.4|137/168|c.16.1.1|1/1|Lumazine synthase| OP:NHOMO 565 OP:NHOMOORG 560 OP:PATTERN 11-1111111111111--1111111--1-1111111111111111111111111-1-111-1--1-11 111-------------------------------------------------111--------------------1-----1-11111------------------1111--------11----111111111111-----111111-11----11111-111---1111111-1111111111--11---1111111111111111111111111111111111------1111111111111111111111-------1-----11----111-1------------11111111111-----------------------11-111111111111--111-1---11---111111111211111-1-11111----------------------------------------------------------------------------------------------------------------------------11111111111111111111111111111---111111-1---1-1---1111111-1-------111111-1111111111111111111-1111111-111111111111111111111111111111111-11-111111111111111111111111---111---1111-111111111111111-111111111111111111111111111111111111111111111111111--111111111111----1111111111111-11111111111111111111111111111111111111111111111111111111111111111111-----------------1--1111-------------------------------------1-11-------1 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------11-1111-12--2-11------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 112 STR:RPRED 74.7 SQ:SECSTR #ccEEEEEEcTTHHHHHHHHHHHHHHHHHTTccccEEEEEccHHHHHHHHHHHHHTTcccEEEEEEEccccccTHHHHHHHHHHHHHHHHHHHHTccEEEEEEcccccccTTc##################################### DISOP:02AL 144-146| PSIPRED cEEEEEEEEEccHHHHHHHHHHHHHHHHHcccccEEEEEEcccHHHHHHHHHHHHHccccEEEEEEEEEcccccHHHHHHHHHHHHHHHHHHHHcccEEEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccc //