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Pyrobaculum aerophilum str. IM2 (paer1)
Gene : AAL64836.1
DDBJ      :             aminotransferase (class 5)
Swiss-Prot:             

Homologs  Archaea  65/68 : Bacteria  417/915 : Eukaryota  145/199 : Viruses  0/175   --->[See Alignment]
c.67.1
:339 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   2->335 2dr1B PDBj 1e-37 33.9 %
:RPS:PDB   4->339 2dr1B PDBj 1e-25 27.9 %
:RPS:SCOP  4->324 2bkwA1  c.67.1.3 * 3e-44 29.2 %
:HMM:SCOP  4->339 2bkwA1 c.67.1.3 * 3.5e-64 34.4 %
:RPS:PFM   39->192 PF00464 * SHMT 7e-04 33.6 %
:HMM:PFM   6->261 PF00266 * Aminotran_5 4.1e-25 23.5 251/371  
:BLT:SWISS 4->318 Y959_METJA 1e-35 33.5 %
:PROS 172->192|PS00595|AA_TRANSFER_CLASS_5

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAL64836.1 GT:GENE AAL64836.1 GT:PRODUCT aminotransferase (class 5) GT:DATABASE GIB00076CH01 GT:ORG paer1 GB:ACCESSION GIB00076CH01 GB:LOCATION 1988828..1989847 GB:FROM 1988828 GB:TO 1989847 GB:DIRECTION + GB:PRODUCT aminotransferase (class 5) GB:NOTE Unclassified GB:PROTEIN_ID AAL64836.1 GB:DB_XREF GI:18161562 LENGTH 339 SQ:AASEQ MKYLTPGPVQLPKFVIEAMARQPPFHRSDDFKKLFKSVLDKLQSLYPAKSIVMPGTGTLAVDTMVYNYVNPGDRVLALVYGEFGKRAVETARIRGAEVVEIERDTPPEPDEIEDALRKIGGVKAILLIHNETSTGIAYKKLKRLVDIAKAYGALLLVDSVSGFPAEPLPPEIDVVATASHKALLAPPGASILYITSQPKATTGVPPSMDLRKFLKMLDHLETPYTPPISVLFALEVSLDHILGFGSKYTEIHQERVNYLYSLVKLRAIPPEGLRSVTVTAFLCEKPKEVMAKLREAGYVIAGGMYKYREKSIRIGVMGDVSLEDLKTVAEVINNVAGRV GT:EXON 1|1-339:0| BL:SWS:NREP 1 BL:SWS:REP 4->318|Y959_METJA|1e-35|33.5|310/385| PROS 172->192|PS00595|AA_TRANSFER_CLASS_5|PDOC00514| BL:PDB:NREP 1 BL:PDB:REP 2->335|2dr1B|1e-37|33.9|333/374| RP:PDB:NREP 1 RP:PDB:REP 4->339|2dr1B|1e-25|27.9|330/374| RP:PFM:NREP 1 RP:PFM:REP 39->192|PF00464|7e-04|33.6|146/378|SHMT| HM:PFM:NREP 1 HM:PFM:REP 6->261|PF00266|4.1e-25|23.5|251/371|Aminotran_5| GO:PFM:NREP 3 GO:PFM GO:0004372|"GO:glycine hydroxymethyltransferase activity"|PF00464|IPR001085| GO:PFM GO:0006544|"GO:glycine metabolic process"|PF00464|IPR001085| GO:PFM GO:0006563|"GO:L-serine metabolic process"|PF00464|IPR001085| RP:SCP:NREP 1 RP:SCP:REP 4->324|2bkwA1|3e-44|29.2|319/381|c.67.1.3| HM:SCP:REP 4->339|2bkwA1|3.5e-64|34.4|334/0|c.67.1.3|1/1|PLP-dependent transferases| OP:NHOMO 878 OP:NHOMOORG 627 OP:PATTERN 1111111211111121-22221212111112221111111111111111111111111111211--11 122----------------------------------------11-------1-----------1--------------11-2111112211-1-------------------------------11111-1111------111-122212211122222222211111212222222222222222211---1222222221222222211111222---31--------32-1111111111111121111-----------------------1-1--------------------------------------------11-22222223222114221222-21--2-111221111111111111-121--11------1243311211111------------2232232212--1-----2---23-----4321111212--------2---12-1------------------------------------11-12121122333322362333133133222-1---11---1-4-1-11-1------------111---1-1--111211332-21211112-111111-11----------11111111111111--1-12--2-2-21111131111111111111---2--1--------11--1------------------------------21211---1-111111111111111-------------11111111--1----------1-2-2---------------11111--11--111111111-1111--------------31122222222222-------11-----11-1---------------------------1-------1------1112211111211 ----11--1---111-111111111111111111111111111111-111111111111111111-11111111111111111111---1-111111111111211-1--2442221----12-1--1-161---11---11-11-----1--1-1111----222-12421121122-----333122122--11111 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 339 STR:RPRED 100.0 SQ:SECSTR ccEcccccccccHHHHHHTTcccccTTcHHHHHHHHHHHHHHHHHTccEEEEEcccHHHHHHHHHHHHccTTcEEEEEEccHHHHHHHHHHHHHHTTcEEEEEEccTTHHHHHHHHHTcTTEEEEEEEcEETTTTEEccHHHHHHHHHHHTTcEEEEEcTTTccccTTTTTccEEEEETTcTTccccccEEEEEcHHHHHHHHTcHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHEEcccTTcccccEEEEEccccHHHHHHHHHHTTEEcEEccGGGTTTEEEEEccccccHHHHHHHHHHHHHHHHHH DISOP:02AL 339-340| PSIPRED ccccccccccccHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHcccEEEEEccHHHHHHHHHHHccccccEEEEEEccHHHHHHHHHHHHcccEEEEEcccccccHHHHHHHHHHccccEEEEEEEcccccccEEccHHHHHHHHHHcccEEEEEcccccccccccccccEEEEcccccccccccEEEEEEcHHHHHHccccccccHHHHHHHHccccccccccHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHcccccccccccccEEEEEEcccHHHHHHHHHHccEEEEcccccccccEEEEEccccccHHHHHHHHHHHHHHHHcc //