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Pyrobaculum aerophilum str. IM2 (paer1)
Gene : AAL64902.1
DDBJ      :             thiamine biosynthesis protein (thiI), probable
Swiss-Prot:THII_PYRAE   RecName: Full=Probable thiamine biosynthesis protein thiI;

Homologs  Archaea  62/68 : Bacteria  365/915 : Eukaryota  2/199 : Viruses  0/175   --->[See Alignment]
c.26.2c.46.1d.308.1
:484 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   54->331 2c5sA PDBj 1e-17 29.3 %
:BLT:PDB   401->467 2k0zA PDBj 2e-08 37.3 %
:RPS:PDB   38->344 2c5sA PDBj 2e-28 23.5 %
:RPS:PDB   397->463 2eg3B PDBj 3e-10 31.3 %
:RPS:SCOP  2->159 2c5sA2  d.308.1.1 * 1e-17 19.7 %
:RPS:SCOP  172->363 2c5sA1  c.26.2.6 * 6e-18 31.1 %
:RPS:SCOP  393->467 1yt8A4  c.46.1.2 * 3e-12 22.7 %
:HMM:SCOP  1->166 2c5sA2 d.308.1.1 * 1.1e-51 37.2 %
:HMM:SCOP  167->356 2c5sA1 c.26.2.6 * 4e-40 33.0 %
:HMM:SCOP  379->468 1yt8A3 c.46.1.2 * 5e-17 32.6 %
:RPS:PFM   99->158 PF02926 * THUMP 5e-04 35.0 %
:RPS:PFM   172->353 PF02568 * ThiI 3e-36 43.4 %
:HMM:PFM   168->355 PF02568 * ThiI 1.4e-53 39.9 188/197  
:HMM:PFM   85->156 PF02926 * THUMP 9.3e-18 41.7 72/93  
:HMM:PFM   398->465 PF00581 * Rhodanese 1.4e-11 38.2 68/113  
:BLT:SWISS 1->484 THII_PYRAE 0.0 100.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAL64902.1 GT:GENE AAL64902.1 GT:PRODUCT thiamine biosynthesis protein (thiI), probable GT:DATABASE GIB00076CH01 GT:ORG paer1 GB:ACCESSION GIB00076CH01 GB:LOCATION complement(2046661..2048115) GB:FROM 2046661 GB:TO 2048115 GB:DIRECTION - GB:PRODUCT thiamine biosynthesis protein (thiI), probable GB:NOTE Biosynthesis of cofactors, prosthetic groups, and carriers; Thiamine GB:PROTEIN_ID AAL64902.1 GB:DB_XREF GI:18161633 LENGTH 484 SQ:AASEQ MEVVIIRVGELTVKRGLTRAEMERLLLRAAREAAEECGGARFEKEPGRIYAYGDVNCLKKALSKVFGVKSVSPARVITYQKITDIALEAADLWSGIVAGKRFAVRVHRVGEHAFTSREVAAEVGAVLVAAGGRVDLEDPELEFYIEIRGNRAYFYTEVIEGPGGLPLGSEGKVLALVSAGIDSPVAAWMLMRRGAHVDVLYCNLGGTITLRHALEVIKRLLAWSYGYNARVIIADCGPVARAMRRGVREELWNIAFKRALYRIGVEIAKRLGAIALATGESLGQVSSQTLQALAAVEAGIDMPILRPLIGMDKDEIVKHAQKIGTYELSAKLPEYCAVFSRRPRKWALREEVEAIDLALYDAITEVVNNAKIVRKRELDEFIKALTPPHDIEIDSAPEGAVIVDLRDEESYKKWHLPGAVRAGVDDVLALVDKLGRDKTYVFYCYSGGLSLDVAESLRKLGIKAYSLRRTRNAVPPSSQGERGN GT:EXON 1|1-484:0| SW:ID THII_PYRAE SW:DE RecName: Full=Probable thiamine biosynthesis protein thiI; SW:GN Name=thiI; OrderedLocusNames=PAE3421; SW:KW Complete proteome; Cytoplasm; RNA-binding; Thiamine biosynthesis. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->484|THII_PYRAE|0.0|100.0|484/484| GO:SWS:NREP 3 GO:SWS GO:0005737|"GO:cytoplasm"|Cytoplasm| GO:SWS GO:0003723|"GO:RNA binding"|RNA-binding| GO:SWS GO:0009228|"GO:thiamin biosynthetic process"|Thiamine biosynthesis| SEG 17->36|ltraemerlllraareaaee| SEG 117->134|revaaevgavlvaaggrv| SEG 160->171|egpgglplgseg| BL:PDB:NREP 2 BL:PDB:REP 54->331|2c5sA|1e-17|29.3|276/372| BL:PDB:REP 401->467|2k0zA|2e-08|37.3|67/110| RP:PDB:NREP 2 RP:PDB:REP 38->344|2c5sA|2e-28|23.5|306/372| RP:PDB:REP 397->463|2eg3B|3e-10|31.3|67/226| RP:PFM:NREP 2 RP:PFM:REP 99->158|PF02926|5e-04|35.0|60/94|THUMP| RP:PFM:REP 172->353|PF02568|3e-36|43.4|182/196|ThiI| HM:PFM:NREP 3 HM:PFM:REP 168->355|PF02568|1.4e-53|39.9|188/197|ThiI| HM:PFM:REP 85->156|PF02926|9.3e-18|41.7|72/93|THUMP| HM:PFM:REP 398->465|PF00581|1.4e-11|38.2|68/113|Rhodanese| GO:PFM:NREP 3 GO:PFM GO:0003723|"GO:RNA binding"|PF02568|IPR020536| GO:PFM GO:0005737|"GO:cytoplasm"|PF02568|IPR020536| GO:PFM GO:0009228|"GO:thiamin biosynthetic process"|PF02568|IPR020536| RP:SCP:NREP 3 RP:SCP:REP 2->159|2c5sA2|1e-17|19.7|152/168|d.308.1.1| RP:SCP:REP 172->363|2c5sA1|6e-18|31.1|190/204|c.26.2.6| RP:SCP:REP 393->467|1yt8A4|3e-12|22.7|75/130|c.46.1.2| HM:SCP:REP 1->166|2c5sA2|1.1e-51|37.2|164/0|d.308.1.1|1/1|THUMP domain-like| HM:SCP:REP 167->356|2c5sA1|4e-40|33.0|182/0|c.26.2.6|1/1|Adenine nucleotide alpha hydrolases-like| HM:SCP:REP 379->468|1yt8A3|5e-17|32.6|89/0|c.46.1.2|1/1|Rhodanese/Cell cycle control phosphatase| OP:NHOMO 442 OP:NHOMOORG 429 OP:PATTERN 111-11-111111111111111111111-1-11111111111122112111112121223311111-- ---------------11-------------------1----------------------------1----1-------11111--------------------------------------------------------------1----------------------------------------11---11111111111111111111111111111111--111111111111111111111111111111111111111111111111---1-11111111111111111111111111111111111111111111111111---------11111-1111-111-11--------11-11111--1--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-----------------------1--111-1111-111111111111111111111----1--------1111111111111-111-1111111111111111111111111111111111111111111111111111-11111111111111--11111------11111111111-111111----------1111111111111111111---------111111111111111--------------------------------111111-1-111-111---11111111111-111-111--- --------11--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 447 STR:RPRED 92.4 SQ:SECSTR #####################################TTcEEEEccccEEEEcTTccHHHHHHHTTcTTEEEEEEEEEEEcHHHHHHHHHHHHHTccccccEEEEEETTccccHHHHHHHHHHHHHTTccccEEccccccEEEEEEEcccEEEEEEEEEEccccccTTTTEEEEEEcccccHHHHHHHHHHHcTEEEEEEEEEcTTTcccHHHHHHHHHHHHHHGcccEEEEEEEcHHHHHHHHHHccGGGHHHHHHHHHHHHHHHHHHHTTccEEEcccccccTTcccHHHHHHHGGGccccEEcTTTTccHHHHHHHHHHTTcHHHHTccccccHHHHHHHHHHHHTccHHHHHHHHHHHHTccccHHHHHHTTTccHccGGGcccccHHHHHHHHHHHHHHHHTTcHHHHHTcccccccEEEcHHHHHHHHHHHHTcEEEcccccHHHHHHHHHHHHTTccEEEccHHHHccGGGEEcTTc DISOP:02AL 476-484| PSIPRED ccEEEEEccEEEEcccccHHHHHHHHHHHHHHHHHccccEEEEEEccEEEEEccHHHHHHHHHHcccEEEEEEEEEEccccHHHHHHHHHHHHHHccccccEEEEEEEcccccccHHHHHHHHHHHHHHcccccEEEccEEEEEEEEEccEEEEEEEEEcccccccccccccEEEEEEccccHHHHHHHHHHcccEEEEEEEcccccccHHHHHHHHHHHHHHHcccccEEEEEccHHHHHHHHHHcccccEEHHHHHHHHHHHHHHHHHHccEEEEEccccccccHHHHHHHHHHHHHccccEEccHHcccHHHHHHHHHHcccHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEEccHHHHHHHcccccEEccHHHHHHHHHHcccccEEEEEEcccHHHHHHHHHHHHcccEEEEEEccEEcccccccccccc //