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Pyrobaculum aerophilum str. IM2 (paer1)
Gene : AAL64909.1
DDBJ      :             conserved hypothetical protein
Swiss-Prot:             

Homologs  Archaea  34/68 : Bacteria  0/915 : Eukaryota  80/199 : Viruses  0/175   --->[See Alignment]
b.40.4c.116.1
:270 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   3->262 1k3rB PDBj 2e-29 40.9 %
:RPS:SCOP  3->112 1k3rA2  c.116.1.2 * 6e-11 33.3 %
:RPS:SCOP  91->143 1k3rA1  b.40.4.10 * 1e-06 25.0 %
:RPS:SCOP  175->260 1k3rA2  c.116.1.2 * 1e-06 25.5 %
:HMM:SCOP  2->262 1k3rA2 c.116.1.2 * 2.1e-40 42.5 %
:RPS:PFM   3->257 PF02598 * DUF171 6e-31 40.3 %
:HMM:PFM   2->258 PF02598 * DUF171 6.6e-65 42.6 249/289  
:BLT:SWISS 3->257 CI114_HUMAN 8e-22 35.5 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAL64909.1 GT:GENE AAL64909.1 GT:PRODUCT conserved hypothetical protein GT:DATABASE GIB00076CH01 GT:ORG paer1 GB:ACCESSION GIB00076CH01 GB:LOCATION complement(2057188..2058000) GB:FROM 2057188 GB:TO 2058000 GB:DIRECTION - GB:PRODUCT conserved hypothetical protein GB:NOTE Hypothetical; Conserved GB:PROTEIN_ID AAL64909.1 GB:DB_XREF GI:18161641 LENGTH 270 SQ:AASEQ MFSIAIPHDFLSEIPDEAGKVRKLGYLARAAAIFKAEYIIIYHYGTPRREDIDFAKTVLEYLVTPPYLRKKVYKIDNRLKLAGLLPPLKIPSHTVPVEPRIGEIREGIVERWDGYYSLIYIGGGKYAKVPKPYPIGTRLLVRIEGTTSRPDTYRAAVYRGAPPDYWGYKIDVRPLQNLSEGFDTVILTGKEGKSICEAKPKIGKKTLVVFGGPRKGVDEIFREAGLEPPGELINFAPGQGVETIRTEEAVFIVLSILNYIAKCSYKREAL GT:EXON 1|1-270:0| BL:SWS:NREP 1 BL:SWS:REP 3->257|CI114_HUMAN|8e-22|35.5|251/376| BL:PDB:NREP 1 BL:PDB:REP 3->262|1k3rB|2e-29|40.9|232/264| RP:PFM:NREP 1 RP:PFM:REP 3->257|PF02598|6e-31|40.3|248/289|DUF171| HM:PFM:NREP 1 HM:PFM:REP 2->258|PF02598|6.6e-65|42.6|249/289|DUF171| RP:SCP:NREP 3 RP:SCP:REP 3->112|1k3rA2|6e-11|33.3|108/191|c.116.1.2| RP:SCP:REP 91->143|1k3rA1|1e-06|25.0|52/71|b.40.4.10| RP:SCP:REP 175->260|1k3rA2|1e-06|25.5|79/191|c.116.1.2| HM:SCP:REP 2->262|1k3rA2|2.1e-40|42.5|181/192|c.116.1.2|1/1|alpha/beta knot| OP:NHOMO 131 OP:NHOMOORG 114 OP:PATTERN 11--11-1--------11111111-1111111111-------------1----11111111-----11 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -1----1-1------11------1----------------------1111111111111111------------------------1-----1---------11-1--1-1321112-----1-21---191-111----1--11-----1--1-1111121-11-11-131111--------111112-11111111- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 232 STR:RPRED 85.9 SQ:SECSTR ##EEEEETTTTTTcccHHHHHHHHHHHHHHHHHTTccEEEEEc######ccccHHHHHHHHHHccHHHHHHHccccGGGTTGGGccccccTTcccc#cccTTcEEEEEEEEEccccEEEEccccEEE############EcccccccccEEEEEEEEEEcccccccccEEccc##ccHHHcccEEEEEccccccTTHHHHHHccEEEEEccccccccccccccE#######EEcccTTcccccccHHHHHHHHHHHHHHHcc######## DISOP:02AL 268-269| PSIPRED cEEEEEcccEEcccccHHHHHHHHHHHHHHHHEEEEEEEEEEEcccccccHHHHHHHHHHHHccccHHHHHccccccccEEEEcccccccccccccccccEEEEEccEEEEEcccccEEEEEccccEEEccccccccEEEEEEcccccccEEEEEEEEccccccccEEEEEEEEcccccccccEEEEEEcccccHHHHHHHHcccEEEEEEccHHHHHHHHHHccccccccEEEEccccccccEEHHHHHHHHHHHHHHHHHccHHHHcc //