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Pyrobaculum aerophilum str. IM2 (paer1)
Gene : AAL64927.1
DDBJ      :             pullulanase
Swiss-Prot:             

Homologs  Archaea  24/68 : Bacteria  63/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
b.1.9c.6.2
:999 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   197->279 2b5dX PDBj 2e-05 24.7 %
:BLT:PDB   694->857 1ug9A PDBj 3e-20 35.0 %
:RPS:PDB   226->362 2c1iA PDBj 8e-11 19.3 %
:RPS:SCOP  176->356 1ufaA2  c.6.2.4 * 1e-21 23.3 %
:RPS:SCOP  694->913 1ug9A3  b.1.9.3 * 2e-59 30.4 %
:HMM:SCOP  17->520 2b5dX2 c.6.2.4 * 2e-83 33.5 %
:HMM:SCOP  689->916 1ug9A3 b.1.9.3 * 1.5e-72 47.1 %
:RPS:PFM   24->82,174->476 PF03065 * Glyco_hydro_57 1e-33 35.2 %
:RPS:PFM   695->902 PF09985 * DUF2223 2e-46 49.3 %
:HMM:PFM   22->486 PF03065 * Glyco_hydro_57 7.8e-123 45.0 351/359  
:HMM:PFM   690->904 PF09985 * DUF2223 7.6e-74 45.2 210/228  
:BLT:SWISS 221->398 AMY1_DICT6 7e-08 25.8 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAL64927.1 GT:GENE AAL64927.1 GT:PRODUCT pullulanase GT:DATABASE GIB00076CH01 GT:ORG paer1 GB:ACCESSION GIB00076CH01 GB:LOCATION 2072150..2075149 GB:FROM 2072150 GB:TO 2075149 GB:DIRECTION + GB:PRODUCT pullulanase GB:NOTE Cell envelope; Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides GB:PROTEIN_ID AAL64927.1 GB:DB_XREF GI:18161661 LENGTH 999 SQ:AASEQ MKWTFLLTLFVIFLAAEPINIIFIFHNHQPWYLDFSKNELALPWVRMHAVGNYLKVPLLINQSGVSVAFTLSGSLIEQLNWYSNGTYTDARFRISEKIARGEPLTIEEKYAMLAVPGGFFDINWQNILNKHPRYAVLLGVRNDAFNKCPPGNMTCVVSRFSDQDFIDLATLFNLLWIDPYIARQNPEIWALRNKTNYTREDLKKVLQIHLELIKQVLPVYKKLAEQGRIELVPVPYSHPLMPLLADMGAIYDLKLHVNLSNSLFKRYLGVTPTGVWPPEQAVNDEVLRLFANAGYIWTVTDEDVLKATAPGASHFKLYFVQYGDRKLYVFFRDKTLSDNIGFRYSSLSPEAALADFVNYLKRVPREKCSVVVIALDGENPWENYPNFGDDFLRVFFQGLAQLEKNGTVKIWKPSDFIKACGNEAAELPQREFKYFDLHLDLSFYKSIRDLPTRLVNGRIAEGSWSGGGSLAVWIGDPDENVWWMWLKKAREEVGVNRTWDVIFPLLIAEASDWPFWYGGDMGSPITFDPIAKSALITYYKRAGLEPPRYLLSPAYPAGTPREDKVAGRGDGRIRTYQGLTVHVNTTHIWAEGAPCGVLYISNPDIPRSPYIFRGAVRGIYGESLNIIADMAIDTCSGVVYLSDGGVFYPVGRAASLSFIGARPGGRLYLEFKGLVYIVNIPEAEVAQQLLLKAADPVGDDFGPGRYQYPKNPVFKPGVFDLTEFSLYDVGDKLRFVFKVRELGDNPWGGPAGFSLQFFHVYINRGSGSRNDTLGLRVALCRDAAWDVALLIGPGWSGGNRIVYSDNTYVDDAMSIKVAPNNTVVADVPKRYIGEFNSSWKITVFLTSWDGYGPDNIRNFGVVSDEWTAGGADPVAVLANVAPRVFDLLAETAEQQIKALTSYQVTRLPNGTYLGRPTRVCAYISGGKATETYTVTQTITITQTEVSTTTKTIATRETITSTYVTTATQVIKEADWTTASLIGILALTIGLVAGLLTRRR GT:EXON 1|1-999:0| BL:SWS:NREP 1 BL:SWS:REP 221->398|AMY1_DICT6|7e-08|25.8|163/686| TM:NTM 3 TM:REGION 4->25| TM:REGION 52->74| TM:REGION 974->995| SEG 929->961|tetytvtqtititqtevstttktiatretitst| BL:PDB:NREP 2 BL:PDB:REP 197->279|2b5dX|2e-05|24.7|81/518| BL:PDB:REP 694->857|1ug9A|3e-20|35.0|160/1019| RP:PDB:NREP 1 RP:PDB:REP 226->362|2c1iA|8e-11|19.3|119/383| RP:PFM:NREP 2 RP:PFM:REP 24->82,174->476|PF03065|1e-33|35.2|326/349|Glyco_hydro_57| RP:PFM:REP 695->902|PF09985|2e-46|49.3|205/226|DUF2223| HM:PFM:NREP 2 HM:PFM:REP 22->486|PF03065|7.8e-123|45.0|351/359|Glyco_hydro_57| HM:PFM:REP 690->904|PF09985|7.6e-74|45.2|210/228|DUF2223| GO:PFM:NREP 2 GO:PFM GO:0003824|"GO:catalytic activity"|PF03065|IPR004300| GO:PFM GO:0005975|"GO:carbohydrate metabolic process"|PF03065|IPR004300| RP:SCP:NREP 2 RP:SCP:REP 176->356|1ufaA2|1e-21|23.3|176/404|c.6.2.4| RP:SCP:REP 694->913|1ug9A3|2e-59|30.4|214/245|b.1.9.3| HM:SCP:REP 17->520|2b5dX2|2e-83|33.5|379/0|c.6.2.4|1/1|Glycoside hydrolase/deacetylase| HM:SCP:REP 689->916|1ug9A3|1.5e-72|47.1|225/0|b.1.9.3|1/1|CBD9-like| OP:NHOMO 108 OP:NHOMOORG 87 OP:PATTERN --4-3--1111111111123231-------------------------------11-311--1----- -11--------------------------------------------------------------------------------1--11----------------------------------------------------------111111111--------1111111----------------1133----------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-------2---1---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1111---------111--1---------------1111111112212---------------------------1111----1-----------------------------111-------------------------------------------------------------------------------------------------------------------------------------1--------------------------1--------------------------------------------------------------------------11--1-----1-- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 471 STR:RPRED 47.1 SQ:SECSTR ####################################################################################################################################################################################################HHHHHHHHHHHHHTTccHHHHHHHHHHHHHTTcEEEEcccccccGGGccHcHHHHHHHHHHHHHHHHHHHHHcccccEEccGGGcccHHHHHTcccEEEcccEEccHHHHccHHHHHHHHHHHccTTEEEEEETTcHHHHccccGGGTccccHHHHHHHHHHHHHHTcc#######ccTTccccccccTTTHHHHHHHHHHHHHHHTTccccEEEEEEEEETccccHHHHHHHHHHHHHHHHHH#HHHTTcccccEEEcccccccccTTccGGGTccHHHHHHHHHHHHHHHHHHHHHcccGGGcHHHHHHHTcTTTTT##################################################################################################################################################################################EcccccccTTTTccccccTTccTTTTcEEEEEEEEETTEEEEEEEEcccccccccccc#cccEEEEEEEEccccccEEccGGcEEE##ccccc#EEEEEEccTTccEEEcTTccEEEccEEEEEGGGTEEEEEEEGGGccccccEEEEEEEEcccGGGcTTccc############################################################################################################################################## PSIPRED ccHHHHHHHHHHHHcccccEEEEEEEcccccEEccccccEEEEEEEEEHHcHHHHHHHHHccccEEEEEEEcHHHHHHHHHHHccccccHHHHHHcccccccccccccEEEEEEEccccccccccccccccHHHHHHHHHHHHHHccccccccEEEEccccHHHHHHHHHHHHHHHccHHHHcccHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEccHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHcccccEEEcHHHHccHHHHHHHHHcccEEEEEEHHHHccccccccccccEEEEEcccEEEEEEccHHHHHHHccccccccccHHHHHHHHHHHHcccccccEEEEEcccccccccccccHHHHHHHHHHHHHHHccccccEEccHHHHHHHccccccccccHHHcccccccHHHHHHHHHHccHHccccccccccccccccEEEEccccHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHccccEEEccccccHHHHHHHHHHHHHHHHHHcccccHHHHccccccccccccccccccccccccccccccEEEEEEEEEEccccEEEEEEEccccccccHHHEEEEcccccccHHHHHHccEEEEEEEEEEccccEEEEEccccEEEEEEcccccEEEEEEEEEEEEccccHHHHHHHHHHccccccccccccccccccccccccccccEEEEEEEEccccEEEEEEEEccccccccccccccEEEEEEEEEEccccccccccccccccccccccEEEEEEccccccccEEEEcccEEEccccEEEEcccccEEEEEcHHHccccccccEEEEEEEcccccccccEEEcccccccEEcccccccccccccccccHHHHccccccHHHHHHHccccccccEEEEEEEEEEEEEEEcccccEEEEEEEEEEEEEEEEccccccEEcccccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHccc //