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Pyrobaculum aerophilum str. IM2 (paer1)
Gene : AAL64938.1
DDBJ      :             conserved hypothetical protein
Swiss-Prot:             

Homologs  Archaea  29/68 : Bacteria  1/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
d.153.1
:219 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   31->182 1ecfB PDBj 7e-09 13.3 %
:RPS:SCOP  33->139 1te5A  d.153.1.1 * 2e-11 25.0 %
:HMM:SCOP  2->200 1ecfA2 d.153.1.1 * 1.2e-14 20.0 %
:HMM:PFM   69->109 PF00310 * GATase_2 0.00089 29.0 31/362  
:HMM:PFM   90->135 PF01612 * 3_5_exonuc 0.00059 28.3 46/174  
:BLT:SWISS 34->128 YAFJ_ECOLI 4e-05 32.3 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAL64938.1 GT:GENE AAL64938.1 GT:PRODUCT conserved hypothetical protein GT:DATABASE GIB00076CH01 GT:ORG paer1 GB:ACCESSION GIB00076CH01 GB:LOCATION complement(2084945..2085604) GB:FROM 2084945 GB:TO 2085604 GB:DIRECTION - GB:PRODUCT conserved hypothetical protein GB:NOTE Hypothetical; Conserved GB:PROTEIN_ID AAL64938.1 GB:DB_XREF GI:18161673 LENGTH 219 SQ:AASEQ MCRLYISKGSIDLSNALKLAAKYDPYMPSDRKQHGDGWGFVAMSQREFFYYKSGLPAWEDPTVVPMREAVLAHARAASPGEPVGPAHSHPYMAHLDDGRIIFVAHNGSVDKKALAAELGIDPTGYTDSFVLTLFLAKNWGNPDKAVENAMRYVKTALNLAVLEFPSLRAYAYTYYRGPREYYAMYLIKEGGAVAVVSSTLLRHIEYSGEELKSGTLLAF GT:EXON 1|1-219:0| BL:SWS:NREP 1 BL:SWS:REP 34->128|YAFJ_ECOLI|4e-05|32.3|93/255| RP:PDB:NREP 1 RP:PDB:REP 31->182|1ecfB|7e-09|13.3|150/500| HM:PFM:NREP 2 HM:PFM:REP 69->109|PF00310|0.00089|29.0|31/362|GATase_2| HM:PFM:REP 90->135|PF01612|0.00059|28.3|46/174|3_5_exonuc| RP:SCP:NREP 1 RP:SCP:REP 33->139|1te5A|2e-11|25.0|104/253|d.153.1.1| HM:SCP:REP 2->200|1ecfA2|1.2e-14|20.0|190/0|d.153.1.1|1/1|N-terminal nucleophile aminohydrolases (Ntn hydrolases)| OP:NHOMO 41 OP:NHOMOORG 30 OP:PATTERN --1-1112222222221212111--------------------------------11111111-1--- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1----------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 185 STR:RPRED 84.5 SQ:SECSTR ##############################GGGcccEEEEEEEcTTccEEEEEEEccHcHHHHHHcccEEEEEEEcccTTccTTGccccccEEEcccccEEEEEEEEETTHHHHHHHHccccccccHHHHHHHHHHHHHTTccHHHHHHHHHccEEEEEEEETTTEEEEEEcTTcccccEEEEEEEccccEEEEEccTTcccccEEE##EETTcEEE## DISOP:02AL 22-33| PSIPRED cHHHHHHHccHHHHHHHHHHccccEEccccccccccccEEEEEEccEEEEEEccccccccHHHHHHHccEEEEEEEccccccccccccccEEEEcccccEEEEEEcccccccccHHHHccccccccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHcccHHEEHHHHHccccccEEEEEEEcccEEEEEEEHHHHHcccccEEEcccEEEEc //