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Pyrobaculum aerophilum str. IM2 (paer1)
Gene : AAL64972.1
DDBJ      :             resolvase, conjectural
Swiss-Prot:             

Homologs  Archaea  11/68 : Bacteria  47/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.4.12c.53.1
:251 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   2->151 3guvA PDBj 4e-06 28.2 %
:RPS:PDB   4->139 3bvpA PDBj 5e-16 27.3 %
:RPS:SCOP  7->156 1gdtA2  c.53.1.1 * 3e-18 26.1 %
:RPS:SCOP  127->198 2oa4A1  a.4.12.3 * 1e-06 12.9 %
:HMM:SCOP  2->157 1gdtA2 c.53.1.1 * 3.2e-27 35.7 %
:RPS:PFM   7->156 PF00239 * Resolvase 3e-13 37.0 %
:HMM:PFM   4->155 PF00239 * Resolvase 5e-34 37.9 140/141  
:HMM:PFM   164->201 PF03811 * Ins_element1 4.9e-05 28.9 38/88  
:BLT:SWISS 5->200 RES2_CLOPE 1e-12 29.8 %
:PROS 7->15|PS00397|RECOMBINASES_1

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAL64972.1 GT:GENE AAL64972.1 GT:PRODUCT resolvase, conjectural GT:DATABASE GIB00076CH01 GT:ORG paer1 GB:ACCESSION GIB00076CH01 GB:LOCATION 2106812..2107567 GB:FROM 2106812 GB:TO 2107567 GB:DIRECTION + GB:PRODUCT resolvase, conjectural GB:NOTE DNA metabolism; DNA replication, recombination, and repair GB:PROTEIN_ID AAL64972.1 GB:DB_XREF GI:18161709 LENGTH 251 SQ:AASEQ MITAVTYIRVSTEEQDPENQRVFLERWAGERGIYIVKHYVDVGVSGATEPWERPAFRQMASEVDKLEPRPRVLLVYEISRLVRSFQELFTLLDVVENRLGLVVVSASEREQALQNLDGVYRQFLRAVLAFVATMEREFIRQRTKTALERARLQGKVWNVAEKRRDLTQAVVEMYLSGASLRETARAFGLSLYEVRRILSNAGVYRPSPYTCPRCFSKMKVAERTAKISNGKYTVVERLYCYNCGYEEIREG GT:EXON 1|1-251:0| BL:SWS:NREP 1 BL:SWS:REP 5->200|RES2_CLOPE|1e-12|29.8|181/189| PROS 7->15|PS00397|RECOMBINASES_1|PDOC00334| BL:PDB:NREP 1 BL:PDB:REP 2->151|3guvA|4e-06|28.2|142/149| RP:PDB:NREP 1 RP:PDB:REP 4->139|3bvpA|5e-16|27.3|128/136| RP:PFM:NREP 1 RP:PFM:REP 7->156|PF00239|3e-13|37.0|138/141|Resolvase| HM:PFM:NREP 2 HM:PFM:REP 4->155|PF00239|5e-34|37.9|140/141|Resolvase| HM:PFM:REP 164->201|PF03811|4.9e-05|28.9|38/88|Ins_element1| GO:PFM:NREP 3 GO:PFM GO:0000150|"GO:recombinase activity"|PF00239|IPR006119| GO:PFM GO:0003677|"GO:DNA binding"|PF00239|IPR006119| GO:PFM GO:0006310|"GO:DNA recombination"|PF00239|IPR006119| RP:SCP:NREP 2 RP:SCP:REP 7->156|1gdtA2|3e-18|26.1|134/140|c.53.1.1| RP:SCP:REP 127->198|2oa4A1|1e-06|12.9|70/93|a.4.12.3| HM:SCP:REP 2->157|1gdtA2|3.2e-27|35.7|140/140|c.53.1.1|1/1|Resolvase-like| OP:NHOMO 60 OP:NHOMOORG 58 OP:PATTERN -------1---------111111--------------------11-----------11---------- -2--------------------------------1-----------------------------------------------------11---1-----------------------------------------------------------------------------------------------------------1-------1-11------------------2-----------------------------------------------------------------------------------------------------------------1-----1-----------------------------------------------------------------------------------1----1--------11111111---1----------------------------------------------------------------1-------------------------------1-----------11------------------1-----------------------1-------------------------------1----1---1------------------------1-11--1-----1----1----1-------------------------------------------111-1111--------------------------------------------------------------1--------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 198 STR:RPRED 78.9 SQ:SECSTR #cEEEEEEEEccccGGGHHHHHHHHHHHHHTTcEEEEEEEEETccccccHHccHHHHHHHHGGcTGGTcccEEEEccHHHHcccHHHHHHHHHHTTGGGTcEEEETTTTEEEEEETTcHHHHHHHHHHHHHHHHHHHHHcEEEEEEEEEEEEEEEcc##cccccccHHHHHHHHHTTccHHHHHHHHTccHHHHHHHHHcc################################################## DISOP:02AL 250-251| PSIPRED ccEEEEEEEEccccccHHHHHHHHHHHHHHcccEEEEEEEEccccccccccccHHHHHHHHHHHHccccccEEEEEEcccccccHHHHHHHHHHHHHcccEEEEEEEccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHccccHHHHHHHHcccHHHHHHHHHHcccccccccccccccccEEEcccccccccccccEEEEEEEEEccHHHHccc //