[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Pyrobaculum aerophilum str. IM2 (paer1)
Gene : AAL65054.1
DDBJ      :             conserved hypothetical protein
Swiss-Prot:             

Homologs  Archaea  66/68 : Bacteria  209/915 : Eukaryota  191/199 : Viruses  0/175   --->[See Alignment]
c.1.19c.37.1
:346 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   10->328 2e87A PDBj 3e-54 37.1 %
:RPS:PDB   55->176 1eexA PDBj 8e-04 10.9 %
:RPS:PDB   168->339 3a1tA PDBj 3e-21 23.6 %
:RPS:SCOP  55->176 1dioA  c.1.19.3 * 3e-04 10.9 %
:RPS:SCOP  154->346 1h65A  c.37.1.8 * 2e-15 14.5 %
:HMM:SCOP  159->330 1ni3A1 c.37.1.8 * 2.4e-37 35.9 %
:RPS:PFM   236->291 PF06858 * NOG1 1e-08 46.4 %
:HMM:PFM   235->291 PF06858 * NOG1 8e-25 54.4 57/58  
:HMM:PFM   170->243 PF04548 * AIG1 5.4e-06 30.1 73/212  
:HMM:PFM   141->186 PF01580 * FtsK_SpoIIIE 0.00031 36.8 38/205  
:BLT:SWISS 9->324 NOG1_YEAST 9e-45 31.2 %
:PROS 199->210|PS00178|AA_TRNA_LIGASE_I

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAL65054.1 GT:GENE AAL65054.1 GT:PRODUCT conserved hypothetical protein GT:DATABASE GIB00076CH01 GT:ORG paer1 GB:ACCESSION GIB00076CH01 GB:LOCATION complement(2181533..2182573) GB:FROM 2181533 GB:TO 2182573 GB:DIRECTION - GB:PRODUCT conserved hypothetical protein GB:NOTE Hypothetical; Conserved GB:PROTEIN_ID AAL65054.1 GB:DB_XREF GI:18161798 LENGTH 346 SQ:AASEQ MEVVDKSKLPYVYAADELISLFLTTYSREEARGSTAEPAFVKQKRLEIKRIVSSGKAIASILREMALRMPFLDRLHPFYRELIDAVIGARAYKHVVAKVGNANLAVKAIAKEAITAVRTAPDKKALLDARRMYKARIIDLLNDLRPELEKMREIVVFLRKLPSIDPELFTIVVAGAPNVGKSSFVRCVSTAKPEVAEYPFTTKQIHLGHIFLRGDRVQVIDTPGLLDRPLSERNQIEKQAILALRHLAGVIVFVVDPTPHSGYSLEMQERLWREIKEGFSAPAVAVLNKIDIATEEELEKARAIFAPIGEISTLNCRGTKEVMDYVLQKYYVPAALEKLRAAARGR GT:EXON 1|1-346:0| BL:SWS:NREP 1 BL:SWS:REP 9->324|NOG1_YEAST|9e-45|31.2|314/647| PROS 199->210|PS00178|AA_TRNA_LIGASE_I|PDOC00161| BL:PDB:NREP 1 BL:PDB:REP 10->328|2e87A|3e-54|37.1|315/353| RP:PDB:NREP 2 RP:PDB:REP 55->176|1eexA|8e-04|10.9|119/551| RP:PDB:REP 168->339|3a1tA|3e-21|23.6|165/254| RP:PFM:NREP 1 RP:PFM:REP 236->291|PF06858|1e-08|46.4|56/58|NOG1| HM:PFM:NREP 3 HM:PFM:REP 235->291|PF06858|8e-25|54.4|57/58|NOG1| HM:PFM:REP 170->243|PF04548|5.4e-06|30.1|73/212|AIG1| HM:PFM:REP 141->186|PF01580|0.00031|36.8|38/205|FtsK_SpoIIIE| GO:PFM:NREP 1 GO:PFM GO:0005525|"GO:GTP binding"|PF06858|IPR010674| RP:SCP:NREP 2 RP:SCP:REP 55->176|1dioA|3e-04|10.9|119/551|c.1.19.3| RP:SCP:REP 154->346|1h65A|2e-15|14.5|193/257|c.37.1.8| HM:SCP:REP 159->330|1ni3A1|2.4e-37|35.9|170/296|c.37.1.8|1/1|P-loop containing nucleoside triphosphate hydrolases| OP:NHOMO 601 OP:NHOMOORG 466 OP:PATTERN 111111111111111111121112111222221111111111111111112111111111111111-- --1--1-----1---------1--11------1111-----------1-11-------------111-1---111111---1------------------------------------------1---1------------------1-----11--------1------------------------11-------------------------------------------------------------------------------------------------------------------------------------111----------------------1---1--------1-------11----1----------1---111-1--1------------------------------------------1-------111111111------1-22-11-------111111111-11------------111111111111111111111111-111-----1--------------11-1-1-1-------1---1-1------111--11-----1---1---1---1----------------------------11-1-11-1-1111111-1------11-11---1-----------1-1-1-----------------------------------111------------------------1-11111111111111-1-------------1---1-1------11-1111111111-1----1-1-1111--1111111111111-111-----11111---------------1------------------------------------------------11-111--1 22-1211-411111111111111111111-1111111111111111111111111111111111111111111111111111111112-12111111111111112112133512121222122312323F2-33611221-22--212132241322213412221222113211122E2212232331332112221 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 339 STR:RPRED 98.0 SQ:SECSTR #######TTcccccHHHHHHHHHHHHHHHHHHHHHHHHHTccccHHHHHTTTccHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHcHHHHHHHHHHHHTcccHHHHHHHHHHHHHHTccHHHHHHHHTcccHHHHHTccHHHHHHHHHHHHHHHHGHHHHHTTccEEEEEEEccTTccHHHHHHHHHTTcEEEEEcTTcccEEEEEEEEETTEEEEEEEcccccccccccHHHHHHHHHHHHHccccEEEEEEEcccccTTccHHHHHHHHHHHHTTTccEEEEEEcHHHHHHTTccccHHHHccEEEccTTTcTTHHHHHHHHHHHHHccccccccccccccc DISOP:02AL 30-31, 340-346| PSIPRED ccccccccccccccHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccEEEEEEcccccHHHHHHHHHccccEEEccccccccEEEEEEEEccEEEEEEEccccccccHHHHHHHHHHHHHHHHHcccEEEEEEEccccccccHHHHHHHHHHHHHHccccEEEEEEccccccHHHHHHHHHHcccEEEEEccccccHHHHHHHHHHHHcccHHHHHHHHHcccc //