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Pyrobaculum aerophilum str. IM2 (paer1)
Gene : AAL65066.1
DDBJ      :             conserved within P. aerophilum
Swiss-Prot:             

Homologs  Archaea  5/68 : Bacteria  0/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
:263 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   92->214 1nbqB PDBj 4e-04 30.4 %
:HMM:PFM   11->62 PF10738 * Lpp-LpqN 0.0004 23.1 52/241  
:BLT:SWISS 165->259 RPIA_TREPS 6e-04 28.4 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAL65066.1 GT:GENE AAL65066.1 GT:PRODUCT conserved within P. aerophilum GT:DATABASE GIB00076CH01 GT:ORG paer1 GB:ACCESSION GIB00076CH01 GB:LOCATION complement(2191692..2192483) GB:FROM 2191692 GB:TO 2192483 GB:DIRECTION - GB:PRODUCT conserved within P. aerophilum GB:NOTE Hypothetical; Conserved within genome GB:PROTEIN_ID AAL65066.1 GB:DB_XREF GI:18161811 LENGTH 263 SQ:AASEQ MKKGVIALLILIAGALAYFVITAGNQAQPPPPPPTPSPAETKPPAVLNTSTAMPTAAETPAIKSYEINYSHVITVYIGDIALKMSGWTVEGVGEYGNYSFGKLVLNIPPQGPVEITYKAATEGRTVYVVTCASGQCQAESGPANYTSFLNLKGDSRAEKGSCSHLGQAGTLYEERGRISPETLSQILSDLSVNGTGVFTAVVCEAGGVPLTTSANVYLNVTLYGQVLTIKLIVDSSAVSISAYNSTRYKLLLTEAKAAQRASA GT:EXON 1|1-263:0| BL:SWS:NREP 1 BL:SWS:REP 165->259|RPIA_TREPS|6e-04|28.4|95/254| TM:NTM 1 TM:REGION 4->26| SEG 6->17|ialliliagala| SEG 29->45|pppppptpspaetkppa| BL:PDB:NREP 1 BL:PDB:REP 92->214|1nbqB|4e-04|30.4|112/208| HM:PFM:NREP 1 HM:PFM:REP 11->62|PF10738|0.0004|23.1|52/241|Lpp-LpqN| OP:NHOMO 7 OP:NHOMOORG 5 OP:PATTERN ------------------13111--------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 112 STR:RPRED 42.6 SQ:SECSTR ###########################################################################################EEETTcccEEEccEEccccccccccccEEETTccE#EEcccc###cccccccEEEEEETTcccccccccccTTTTccccc#######cTTTccEEEccccGGGcccEEEEEEccccccEEccc################################################# DISOP:02AL 1-3, 26-42, 257-263| PSIPRED cccHHHHHHHHHHHHHEEEEEEccccccccccccccccccccccEEEEcccccccccccccccEEEccEEEEEEEEcccEEEEEEEEEEEEEcccccEEEEEEEEEcccccccEEEEEEEEcccEEEEEEEEccEEEEcccccccEEEEEEEEEEccccccHHHcccccEEEEEEccccHHHHHHHHHHcEEcccEEEEEEEEEEccEEEEEEcEEEEEEEEcccEEEEEEEEEccEEEEEEccHHHHHHHHHHHHHHHcccc //