[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Pyrobaculum aerophilum str. IM2 (paer1)
Gene : AAL65089.1
DDBJ      :             protease IV, conjectural
Swiss-Prot:             

Homologs  Archaea  15/68 : Bacteria  107/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
c.14.1
:608 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   108->195 3bf0D PDBj 7e-05 27.3 %
:RPS:PDB   86->288 3bezC PDBj 1e-23 22.0 %
:RPS:SCOP  71->266 1tg6A1  c.14.1.1 * 4e-12 20.0 %
:RPS:SCOP  244->280 1pixA2  c.14.1.4 * 6e-05 5.4 %
:HMM:SCOP  62->271 1tg6A1 c.14.1.1 * 5.1e-37 27.7 %
:RPS:PFM   89->155 PF00574 * CLP_protease 2e-04 26.9 %
:RPS:PFM   169->277 PF01343 * Peptidase_S49 2e-05 30.6 %
:HMM:PFM   145->185 PF01343 * Peptidase_S49 1.4e-12 53.7 41/154  
:HMM:PFM   218->282 PF01343 * Peptidase_S49 7.8e-08 26.6 64/154  
:HMM:PFM   7->81 PF06103 * DUF948 1e-06 28.4 74/90  
:BLT:SWISS 99->288 SPPA_BACHD 1e-13 31.4 %
:TM
:COIL
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAL65089.1 GT:GENE AAL65089.1 GT:PRODUCT protease IV, conjectural GT:DATABASE GIB00076CH01 GT:ORG paer1 GB:ACCESSION GIB00076CH01 GB:LOCATION complement(2213340..2215166) GB:FROM 2213340 GB:TO 2215166 GB:DIRECTION - GB:PRODUCT protease IV, conjectural GB:NOTE Protein fate; Degradation of proteins, peptides, and glycopeptides GB:PROTEIN_ID AAL65089.1 GB:DB_XREF GI:18161836 LENGTH 608 SQ:AASEQ MAKALALAGLVLAIAALALGIALWWGLLNAERTITMKIDDVRSSITAEVKTLNSSLTERLASINKTLEELTVRVKRLEKRAAAEREIVIVPVDQPIFDYYVDFLIKYVKKLQFDNKTAGVILLINSPGGAVGATERLYSTIKGLNKTVYAVVAGLAASGAYYTAVAAGRIYATPSSWVGSIGVVALLWPDEYLIDLPDYIYTTGPFKYYGMDLTEFYNDIEKTRANFVAAVLKGRAGRLKADPEVFETAKIFNAETALRLGLIDKIGGLWDAVEDMARELGLKNYTVVDIYEKYNATGFGIVVPLISGNKIPLQFLMNVSAPPVFYLWPGAIQIPHHPINVTPMPPAAPPEEKKPYRPYVVLDLSHGNIIPRGFFEVLAKELVERGFALRLARDELSLQQLLENATGLIIVNPTVPFTDLAAEAVYNATRRGVRALYFADMRASGMISAPPFIIITPYSATTVFDPLLTYFNITVIRAVYNFTGLGAHDFAANWQYVHVNGSLFNASRLILLSPTAFAATSGLKLRVKAYMFGYGEDVYTIAVRTGNFTAVGSVRSFTPYFIQLGDNYKFFKTLINWLVEPRPIAPPPKRPSGPTPLIPPIPPHTTYP GT:EXON 1|1-608:0| BL:SWS:NREP 1 BL:SWS:REP 99->288|SPPA_BACHD|1e-13|31.4|185/331| COIL:NAA 38 COIL:NSEG 1 COIL:REGION 46->83| TM:NTM 1 TM:REGION 5->27| SEG 2->28|akalalaglvlaiaalalgialwwgll| SEG 156->168|aasgayytavaag| SEG 343->359|pmppaappeekkpyrpy| SEG 581->607|prpiapppkrpsgptplippipphtty| BL:PDB:NREP 1 BL:PDB:REP 108->195|3bf0D|7e-05|27.3|88/476| RP:PDB:NREP 1 RP:PDB:REP 86->288|3bezC|1e-23|22.0|200/468| RP:PFM:NREP 2 RP:PFM:REP 89->155|PF00574|2e-04|26.9|67/179|CLP_protease| RP:PFM:REP 169->277|PF01343|2e-05|30.6|108/153|Peptidase_S49| HM:PFM:NREP 3 HM:PFM:REP 145->185|PF01343|1.4e-12|53.7|41/154|Peptidase_S49| HM:PFM:REP 218->282|PF01343|7.8e-08|26.6|64/154|Peptidase_S49| HM:PFM:REP 7->81|PF06103|1e-06|28.4|74/90|DUF948| GO:PFM:NREP 4 GO:PFM GO:0004252|"GO:serine-type endopeptidase activity"|PF00574|IPR001907| GO:PFM GO:0006508|"GO:proteolysis"|PF00574|IPR001907| GO:PFM GO:0006508|"GO:proteolysis"|PF01343|IPR002142| GO:PFM GO:0008233|"GO:peptidase activity"|PF01343|IPR002142| RP:SCP:NREP 2 RP:SCP:REP 71->266|1tg6A1|4e-12|20.0|170/184|c.14.1.1| RP:SCP:REP 244->280|1pixA2|6e-05|5.4|37/287|c.14.1.4| HM:SCP:REP 62->271|1tg6A1|5.1e-37|27.7|191/0|c.14.1.1|1/1|ClpP/crotonase| OP:NHOMO 129 OP:NHOMOORG 123 OP:PATTERN ----------------1-21211-1--1------1-------------------11-1111------- -----------------------------------------------------------------------------------1--1-1111--------1-------------------------1------------11-----------111------------11--1----------1-------1------------------11--1-----------11111-----------------------------------------------------------------------------------------------------------------------1-----------1------1--21------------------------------------------------------------------------------------------------------------------------------------------1------1------1--1111111--1--------------1--------------11--1--2-1---1------1---11-1--1---1--1----------1--------1-1-----1-11-------------1--1----1---------------------------------------------------------------------------------------------------------------11------------------11111111111-11111111111111111---------------------1------------1111--1-111111------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 222 STR:RPRED 36.5 SQ:SECSTR ##################################################################cccEEcccEEHHHHHHccEEEccEcccccTTcEEHHHHHHHHHHHHHcTTEEEEEEEEEEccccHHHHHHHHHHHHHTTccEEEEEEEEEETHHHHTTTTccEEEEcTTcEEEcccEEEEEEEcHHHHHcccccccccGGGcccTTcccHHHHHHHHHHHHHHHHHHHHTccHHHHHHTcTTTcEEEHHHHHHTccccEEccHHHHHHHHHHcccccccEEE################################################################################################################################################################################################################################################################################################################################ DISOP:02AL 1-5, 70-80, 586-595, 604-608| PSIPRED ccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHccHHHHHHHHHHHHHHHHHHHHccccEEEEEEcccccHHHHHHHHHHHHHHHHcccccEEEEEEEcccccHHHHHHHHHHHHHccccEEEEEccHHHHHHHHHHccccEEEEccccccccccEEEEccccHHHcccccEEEEcccccccccHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHcccEEcHHHHHHcccccccccHHHHHHHHHHHHcccccEEEEEEccccccHHHHHHHHHHHHHHHHHHcccccccEEEEEcccEEEcccEEEEEEEccccccccccccccccEEEEEcccccccHHHHHHHHHHHHHcccEEEHHHHHHHHHHHHHcccEEEEEccccccHHHHHHHHHHHHHHccEEEEEEccccccEEEEcccEEEcccHHHHHHHHHHHHHccHHHHHHHHcccccccHHHcccEEEEEEccHHccHHEEHcccccccccccEEEEEEEEEEEEcccEEEEEEEEccEEEEcccccccHHHHEEcccHHHHHHHHHHHcccccccccccccccccccccccccccccc //