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Candidatus Pelagibacter ubique HTCC1062 (pubi0)
Gene : AAZ20838.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  1/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
:483 amino acids
:PSIPRED
:DISOPRED
:HMM:PFM   36->68 PF03563 * Bunya_G2 0.00014 33.3 33/286  
:BLT:SWISS 279->348 RPOC2_CHLRE 2e-04 34.3 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ20838.1 GT:GENE AAZ20838.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00256CH01 GT:ORG pubi0 GB:ACCESSION GIB00256CH01 GB:LOCATION complement(12333..13784) GB:FROM 12333 GB:TO 13784 GB:DIRECTION - GB:PRODUCT hypothetical protein GB:PROTEIN_ID AAZ20838.1 GB:DB_XREF GI:71061835 LENGTH 483 SQ:AASEQ MKQIVKNFNNLINKTIFKLKNKTNNKFHVSTFNKYIITTIIILFTYIFYLLIPLLYDKNWIQNKVVTKLGNEFNINLSNSFDISYRILPKPHYLIRDSKISLAEIKTLNVFISQNNFFNKDSIRINEVVIEEANFSLLSNNLKPLYKDSENKFSKKKIKINNSNIFLKDNLNEVISIIKISNAFLFFDEKNLFNLFDLNGEIFNIPFTLNYQNTINSQKNINIKAPDLKLKIIDKFFKKDEDLKSGMNNISILNSSINTKYSIKDQIVIFQSDGSRIYNSKIDYNGQLAINPFDLNLKINLYDYKISNLFTPNSIIYEFIKSGLLFNENISVQTLVNIKSTKKDKIFNEAKLELKVLNGKINFDKSMFINNNIGLLEVSNSDLFLENDRLILTANLSIDIKDIDKLYSFLNTSKNSRKNIRNIKLNIIYDLLGDEIAFKNIKIDENKVSDQFYNITEGFNDTNFNNLTKSRRLLNELIGLYEG GT:EXON 1|1-483:0| BL:SWS:NREP 1 BL:SWS:REP 279->348|RPOC2_CHLRE|2e-04|34.3|67/3120| TM:NTM 1 TM:REGION 33->55| SEG 35->52|yiittiiilftyifylli| SEG 151->166|nkfskkkikinnsnif| SEG 227->244|dlklkiidkffkkdedlk| SEG 248->258|nnisilnssin| SEG 413->428|sknsrknirniklnii| HM:PFM:NREP 1 HM:PFM:REP 36->68|PF03563|0.00014|33.3|33/286|Bunya_G2| OP:NHOMO 1 OP:NHOMOORG 1 OP:PATTERN -------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-3, 149-157| PSIPRED cHHHHHHHHHHHHHHHHHHHcccccEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHcccEEEEEEccccEEEEEEEccccEEEEcccEEEEEEEEEEEEEEcccccccccEEEEEEEEEccccHHHHccccccccccccccccEEEEEcccEEEEEccHHHHHHHHEEccEEEEEEccccEEEEEcccEEEEEEEEEEEHHHccccccEEEEcccEEEHHHHHHHcccHHHHcccccEEEEEcccccEEEEEEEEEEEEccccEEEccccccccEEEEEEEEEEEEEEEEEEEEccccccHHHHHHHHHccEEEcccccEEEEEEEcccccHHHHcccEEEEEEEEcEEccccEEEEEccEEEEEEccccEEEEcccEEEEEEcEEEHHHHHHHHHHHHccccccccHHEEEEEEEEEEccccEEEEEEEEcccHHcHHHHHHHccccccccHHHHHHHHHHHHHHHHccc //