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Candidatus Pelagibacter ubique HTCC1062 (pubi0)
Gene : AAZ20880.1
DDBJ      :             Sulfate transporter/antisigma-factor antagonist STAS
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  2/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.13.2
:94 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   9->93 1thnB PDBj 2e-07 30.6 %
:RPS:PDB   1->90 1auzA PDBj 3e-10 24.4 %
:RPS:SCOP  1->91 1vc1A  c.13.2.1 * 7e-11 22.0 %
:HMM:SCOP  1->91 1h4xA_ c.13.2.1 * 1.9e-19 29.7 %
:HMM:PFM   4->89 PF01740 * STAS 3.9e-12 20.9 86/117  
:BLT:SWISS 5->81 RSBV_BACSU 6e-10 33.8 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ20880.1 GT:GENE AAZ20880.1 GT:PRODUCT Sulfate transporter/antisigma-factor antagonist STAS GT:DATABASE GIB00256CH01 GT:ORG pubi0 GB:ACCESSION GIB00256CH01 GB:LOCATION 66490..66774 GB:FROM 66490 GB:TO 66774 GB:DIRECTION + GB:PRODUCT Sulfate transporter/antisigma-factor antagonist STAS GB:PROTEIN_ID AAZ20880.1 GB:DB_XREF GI:71061877 LENGTH 94 SQ:AASEQ MKYKVTDNENVSTVFLTGEIDMDVADEVREIVFPLIDAGKEVHLNLKDVPYMDSSGISIIIESNQRAREKNTKVELKEVSQPVEKVLAMARKFL GT:EXON 1|1-94:0| BL:SWS:NREP 1 BL:SWS:REP 5->81|RSBV_BACSU|6e-10|33.8|77/109| BL:PDB:NREP 1 BL:PDB:REP 9->93|1thnB|2e-07|30.6|85/114| RP:PDB:NREP 1 RP:PDB:REP 1->90|1auzA|3e-10|24.4|90/116| HM:PFM:NREP 1 HM:PFM:REP 4->89|PF01740|3.9e-12|20.9|86/117|STAS| RP:SCP:NREP 1 RP:SCP:REP 1->91|1vc1A|7e-11|22.0|91/110|c.13.2.1| HM:SCP:REP 1->91|1h4xA_|1.9e-19|29.7|91/111|c.13.2.1|1/1|Anti-sigma factor antagonist SpoIIaa| OP:NHOMO 3 OP:NHOMOORG 2 OP:PATTERN -------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-------------------------------2------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 93 STR:RPRED 98.9 SQ:SECSTR ccccEEEETTEEEEcccccccTTHHHHHHHHHHHHHccccEEEEEccccccccTTHHHHHHHHHHHHHHHTccccEEcccTTTTHHHHHHTHH# PSIPRED cEEEEEEEccEEEEEEEEEEEEccHHHHHHHHHHHHHccccEEEEcccccEEcHHHHHHHHHHHHHHHHcccEEEEEEccHHHHHHHHHHHHHc //