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Candidatus Pelagibacter ubique HTCC1062 (pubi0)
Gene : AAZ20917.1
DDBJ      :             Uncharacterized ACR
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  1/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
d.194.1
:111 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   2->109 1xfjA PDBj 2e-05 25.0 %
:RPS:SCOP  1->110 1rv9A  d.194.1.2 * 3e-10 18.1 %
:HMM:SCOP  1->110 1xfjA_ d.194.1.2 * 5.4e-24 29.1 %
:HMM:PFM   4->109 PF02578 * Cu-oxidase_4 2.4e-25 29.7 101/233  
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ20917.1 GT:GENE AAZ20917.1 GT:PRODUCT Uncharacterized ACR GT:DATABASE GIB00256CH01 GT:ORG pubi0 GB:ACCESSION GIB00256CH01 GB:LOCATION 106800..107135 GB:FROM 106800 GB:TO 107135 GB:DIRECTION + GB:PRODUCT Uncharacterized ACR GB:NOTE YfiH family COG1496 GB:PROTEIN_ID AAZ20917.1 GB:DB_XREF GI:71061914 LENGTH 111 SQ:AASEQ MIKKGCDPKNVTAVIGPCISVKNYEVKKDFIKKLIKKDGKNKKFFKKIQNKDFFDLKKYVLSQLKALNIKKIDIINKNTFNPKNNFFSARRSISRNENDYGRNISVIMINS GT:EXON 1|1-111:0| SEG 27->55|kkdfikklikkdgknkkffkkiqnkdffd| SEG 68->87|nikkidiinkntfnpknnff| BL:PDB:NREP 1 BL:PDB:REP 2->109|1xfjA|2e-05|25.0|108/254| HM:PFM:NREP 1 HM:PFM:REP 4->109|PF02578|2.4e-25|29.7|101/233|Cu-oxidase_4| RP:SCP:NREP 1 RP:SCP:REP 1->110|1rv9A|3e-10|18.1|105/242|d.194.1.2| HM:SCP:REP 1->110|1xfjA_|5.4e-24|29.1|110/256|d.194.1.2|1/1|CNF1/YfiH-like putative cysteine hydrolases| OP:NHOMO 1 OP:NHOMOORG 1 OP:PATTERN -------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 108 STR:RPRED 97.3 SQ:SECSTR #HHTTccGGGcEEEEcccccTTTcEEHHHHHHHHHcTTGGGGEEEcccTTEEEEcHHHHHHHHHHHTTccEEEEccccTTTcTTTcccHHHHHHTTccccccEEEEEEE## DISOP:02AL 1-4| PSIPRED ccccccccccEEEEEccccccccccccHHHHHHHHHHccccHHHcccccccEEEcHHHHHHHHHHHcccccEEEcccccccccccccccccccccccccccEEEEEEEEcc //