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Candidatus Pelagibacter ubique HTCC1062 (pubi0)
Gene : AAZ20921.1
DDBJ      :             Predicted GTPase
Swiss-Prot:             

Homologs  Archaea  67/68 : Bacteria  909/915 : Eukaryota  196/199 : Viruses  0/175   --->[See Alignment]
c.37.1d.15.10
:357 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   1->356 1jalA PDBj 1e-87 50.7 %
:RPS:PDB   4->356 2dwqB PDBj 9e-75 40.6 %
:RPS:SCOP  4->232 1wxqA1  c.37.1.8 * 1e-33 22.2 %
:RPS:SCOP  273->356 1jalA2  d.15.10.2 * 8e-28 67.9 %
:HMM:SCOP  3->295 1wxqA1 c.37.1.8 * 2.4e-70 41.6 %
:HMM:SCOP  273->354 1ni3A2 d.15.10.2 * 4.4e-33 63.4 %
:RPS:PFM   14->129 PF01926 * MMR_HSR1 2e-23 56.6 %
:RPS:PFM   273->356 PF06071 * YchF-GTPase_C 2e-30 64.3 %
:HMM:PFM   273->356 PF06071 * YchF-GTPase_C 3.3e-40 60.7 84/84  
:HMM:PFM   14->147 PF01926 * MMR_HSR1 3.9e-27 42.7 96/108  
:BLT:SWISS 1->356 ENGD_HAEIN 8e-94 50.6 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ20921.1 GT:GENE AAZ20921.1 GT:PRODUCT Predicted GTPase GT:DATABASE GIB00256CH01 GT:ORG pubi0 GB:ACCESSION GIB00256CH01 GB:LOCATION 109411..110484 GB:FROM 109411 GB:TO 110484 GB:DIRECTION + GB:PRODUCT Predicted GTPase GB:NOTE probable translation factor GB:PROTEIN_ID AAZ20921.1 GB:DB_XREF GI:71061918 LENGTH 357 SQ:AASEQ MSFKCGIVGLPNVGKSTLFNALTNSSKAQAANFPFCTIEPNVGVVPVPDERLDKLVEISKSKKKINTTIEFVDIAGLVAGASKGEGLGNKFLSHIREVDAVIHMIRCFDSDDIQNVNPTVDPIRDLEIIETEMMLADLESIQKRLEKNNKKNVDEEQLKILEIASDCINNSKDIQILYEQFDKKLISQSGLLSLKPKIFVCNVDEASVQNGNKYTQAFIDKYGEKNTLIVSADIENQINQLENEEKENYMEMIGLKRTGLNMLIQKGYNILELDTYFTSGPEETRAWTIQKNCTAPKAAGEIHTDFEKGFIRAETIAYEDFIANDGWVNSKTNGKMRLEGKDYIVKDGDILNFRFNT GT:EXON 1|1-357:0| BL:SWS:NREP 1 BL:SWS:REP 1->356|ENGD_HAEIN|8e-94|50.6|354/363| SEG 58->65|iskskkki| SEG 234->248|ienqinqleneeken| BL:PDB:NREP 1 BL:PDB:REP 1->356|1jalA|1e-87|50.7|339/348| RP:PDB:NREP 1 RP:PDB:REP 4->356|2dwqB|9e-75|40.6|325/337| RP:PFM:NREP 2 RP:PFM:REP 14->129|PF01926|2e-23|56.6|99/105|MMR_HSR1| RP:PFM:REP 273->356|PF06071|2e-30|64.3|84/84|YchF-GTPase_C| HM:PFM:NREP 2 HM:PFM:REP 273->356|PF06071|3.3e-40|60.7|84/84|YchF-GTPase_C| HM:PFM:REP 14->147|PF01926|3.9e-27|42.7|96/108|MMR_HSR1| GO:PFM:NREP 2 GO:PFM GO:0005525|"GO:GTP binding"|PF01926|IPR002917| GO:PFM GO:0005622|"GO:intracellular"|PF01926|IPR002917| RP:SCP:NREP 2 RP:SCP:REP 4->232|1wxqA1|1e-33|22.2|203/273|c.37.1.8| RP:SCP:REP 273->356|1jalA2|8e-28|67.9|84/85|d.15.10.2| HM:SCP:REP 3->295|1wxqA1|2.4e-70|41.6|291/0|c.37.1.8|1/1|P-loop containing nucleoside triphosphate hydrolases| HM:SCP:REP 273->354|1ni3A2|4.4e-33|63.4|82/0|d.15.10.2|1/1|TGS-like|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j6664455773425565443 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 356 STR:RPRED 99.7 SQ:SECSTR HHHcEEEEccccccHHHHHHHHHHHHHTccccEEEEEcccHHHHHEcccHHHHHTccTTccccEEccEEEEEETTTTcccccccccTTcHHHHHHHHccEEEEcEEccccccEEEEEEccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcGGGHHHHHHHHHHHHTTccGGGcccccTTHHHHHcccGGGccEEccEEccTTTTTTTcHHHHHHHHHHHHHHccEEcHHHHHHTTTcTHHHHHHHHHHTTccccHHHHHHHHHHHHTTEEEEEEcccccEEEEEEETTccHHHHHHTTcTHHHHHEEEEEEEEHHHHHHHccHHHHHHHTccEEEcccccccTTEEEEEEEc# PSIPRED cccEEEEEEcccccHHHHHHHHHcccccEEccccccccccEEEEEEEcccccEEEEEcccccccccEEEEEEEEccccccccccccHHHHHHHHHHHccEEEEEEccccccHHHHccccccHHHHHHHHHHHHHHccHHHHHHHHHHHccccccHHHHHHHHHHHHHHccccccHHcccHHHHHHHHHHcHHHHccEEEEEEccccccccccHHHHHHHHHHccccEEEEEHHHHHHHHcccHHHHHHHHHHHccccccHHHHHHHHHHHcccEEEEcccccccccEEEcccccHHHHHHHHHHHHHHccEEEEEEEHHHHHHcccHHHHHHccccEEcccEEEEccccEEEEEEcc //