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Candidatus Pelagibacter ubique HTCC1062 (pubi0)
Gene : AAZ20963.1
DDBJ      :             putative glutamate synthetas
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  45/915 : Eukaryota  35/199 : Viruses  0/175   --->[See Alignment]
:78 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   13->54 2qh7B PDBj 1e-04 51.2 %
:RPS:PFM   10->41 PF09360 * zf-CDGSH 4e-04 46.9 %
:HMM:PFM   8->41 PF09360 * zf-CDGSH 4.1e-20 57.6 33/38  
:HMM:PFM   45->77 PF09360 * zf-CDGSH 4.7e-15 34.4 32/38  
:BLT:SWISS 11->76 CISD3_HUMAN 2e-19 54.5 %
:REPEAT 2|11->40|47->76

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ20963.1 GT:GENE AAZ20963.1 GT:PRODUCT putative glutamate synthetas GT:DATABASE GIB00256CH01 GT:ORG pubi0 GB:ACCESSION GIB00256CH01 GB:LOCATION 145353..145589 GB:FROM 145353 GB:TO 145589 GB:DIRECTION + GB:PRODUCT putative glutamate synthetas GB:PROTEIN_ID AAZ20963.1 GB:DB_XREF GI:71061960 LENGTH 78 SQ:AASEQ MTKGQNAGNGPIAVDVEKDKSYYWCSCGKSSKQPFCDGSHQGSEFTPLAYKAEETKKVFFCACKQTNNQPLCDGSHSK GT:EXON 1|1-78:0| BL:SWS:NREP 1 BL:SWS:REP 11->76|CISD3_HUMAN|2e-19|54.5|66/127| NREPEAT 1 REPEAT 2|11->40|47->76| BL:PDB:NREP 1 BL:PDB:REP 13->54|2qh7B|1e-04|51.2|41/65| RP:PFM:NREP 1 RP:PFM:REP 10->41|PF09360|4e-04|46.9|32/35|zf-CDGSH| HM:PFM:NREP 2 HM:PFM:REP 8->41|PF09360|4.1e-20|57.6|33/38|zf-CDGSH| HM:PFM:REP 45->77|PF09360|4.7e-15|34.4|32/38|zf-CDGSH| GO:PFM:NREP 2 GO:PFM GO:0043231|"GO:intracellular membrane-bounded organelle"|PF09360|IPR018967| GO:PFM GO:0051537|"GO:2 iron, 2 sulfur cluster binding"|PF09360|IPR018967| OP:NHOMO 101 OP:NHOMOORG 80 OP:PATTERN -------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------111-1--1------------11-----11-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-------------------------------------------------1--------------------------------------------------11-----1-1-------------1-------------------------------2--1----------------------------------------1-------------1------------11-------------------1111---------------------------------1------------2---1-------1----1-11-11---1--2--------------------------------------------------------------------------------------------------1111-1------------------------------------------------------------1------11--------------------------------------------------------------------------- 1---21--31--11------------------------------------------------------------------------------------------1--2-12121----------32---141---1----1--1------1-------1---3211-111-222-------------1----------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 41 STR:RPRED 52.6 SQ:SECSTR ############cccGGGcEEEE#ccccccTcTTccccHHHccccccEEEEccc######################## DISOP:02AL 1-7, 74-78| PSIPRED ccccEEcccccEEEEEccccEEEEEEcccccccccccccccccccccEEEEEEccccEEEEccccccccccccccccc //