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Candidatus Pelagibacter ubique HTCC1062 (pubi0)
Gene : AAZ20966.1
DDBJ      :             pirin
Swiss-Prot:             

Homologs  Archaea  24/68 : Bacteria  506/915 : Eukaryota  163/199 : Viruses  0/175   --->[See Alignment]
b.82.1
:279 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   16->274 1j1lA PDBj 1e-40 37.9 %
:RPS:PDB   34->175 1e3dA PDBj 2e-28 15.9 %
:RPS:SCOP  6->279 1j1lA  b.82.1.12 * 1e-67 35.1 %
:HMM:SCOP  2->277 1j1lA_ b.82.1.12 * 1.3e-78 42.6 %
:RPS:PFM   20->121 PF02678 * Pirin 1e-25 51.0 %
:RPS:PFM   177->277 PF05726 * Pirin_C 2e-17 41.4 %
:HMM:PFM   21->121 PF02678 * Pirin 2.6e-39 56.4 101/107  
:HMM:PFM   175->277 PF05726 * Pirin_C 2.4e-33 42.2 102/104  
:HMM:PFM   150->167 PF00467 * KOW 0.00024 38.9 18/32  
:BLT:SWISS 6->277 Y481_CAUCR 9e-69 46.1 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ20966.1 GT:GENE AAZ20966.1 GT:PRODUCT pirin GT:DATABASE GIB00256CH01 GT:ORG pubi0 GB:ACCESSION GIB00256CH01 GB:LOCATION 147644..148483 GB:FROM 147644 GB:TO 148483 GB:DIRECTION + GB:PRODUCT pirin GB:PROTEIN_ID AAZ20966.1 GB:DB_XREF GI:71061963 LENGTH 279 SQ:AASEQ MSNIEVEKIIEPVAASDGAGVKLKRSIGTHLIDYHDPFLMLDEFGSENKDDYIGGFPPHPHRGIETVTYMLAGDFEHKDSTGGEGIMTAGDVQWMKTGSGIIHSEMPAMKEGKLHGFQLWVNMPAKLKMTKPEYIYIDADKMSTHKDDDKTVKVIAGKFQDAEGPVKGHNVEPVYFDVELEKGKEFNFDLPSTHNSLIYLVEGEIKVGNQDHDAVKDSTLIILTRGEKLKVSSLTKAKFLLISGKPIGEPIARGGPFVMNTKAEILQAVQDYHNDTFVK GT:EXON 1|1-279:0| BL:SWS:NREP 1 BL:SWS:REP 6->277|Y481_CAUCR|9e-69|46.1|269/276| BL:PDB:NREP 1 BL:PDB:REP 16->274|1j1lA|1e-40|37.9|248/282| RP:PDB:NREP 1 RP:PDB:REP 34->175|1e3dA|2e-28|15.9|132/262| RP:PFM:NREP 2 RP:PFM:REP 20->121|PF02678|1e-25|51.0|102/106|Pirin| RP:PFM:REP 177->277|PF05726|2e-17|41.4|99/103|Pirin_C| HM:PFM:NREP 3 HM:PFM:REP 21->121|PF02678|2.6e-39|56.4|101/107|Pirin| HM:PFM:REP 175->277|PF05726|2.4e-33|42.2|102/104|Pirin_C| HM:PFM:REP 150->167|PF00467|0.00024|38.9|18/32|KOW| RP:SCP:NREP 1 RP:SCP:REP 6->279|1j1lA|1e-67|35.1|268/288|b.82.1.12| HM:SCP:REP 2->277|1j1lA_|1.3e-78|42.6|270/288|b.82.1.12|1/1|RmlC-like cupins| OP:NHOMO 1354 OP:NHOMOORG 693 OP:PATTERN ------11111111-1-1111---1-----1------------111-1--1-3--------111---- 12212--1111---33311-13--33111112333323221322-112----11-1-1----2-1-1242----------1-------2221-1-----2-2-42563-2---------------1--111----1----------1111111-1111-111111-22221-------------------111-1111111111111111-----111-22--11------12-------------------------------------------------------------------------------------------12121111111-1-1-11-1111--11-----11---------------2-13333-----22223233222221111111-112-11111111123-222112122122122322211-112221111111112211311-----------------------------122321232336776774333255455455357544445-23343333353426-341223331-------2122424---1-1-1-1--112-11-11--3323541-1-1----------------------1121211222-313333322-3333121132----1--2------2123-111111111111-1111111111111111111222111132222222222222222311111111-222222222222---3-----112111342111--1-----11115555534--4234544334433333233311---11-11111211111111114534344333------1-332222------------------------------------------------1 ----A32-----11112111121212211111111111111111112222233411111111512-11-12-111-----144426-1-232232622222-2212-3253111-12111-11111111232-11111111-1111111111-11--12222112--------111212M21211334614143B9344 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 273 STR:RPRED 97.8 SQ:SECSTR cccEEEcccGGGccEEETTTEEEEEEcTTTcGGcTTcEEcHHHHHGGcccEEEccccccHHHHHHHHHHHHTTccccccTTccccEEcTTcEccHHHHcccHHHHcTTHHHHHTTccccccccHHHHTTcccGGGTccGGGHHHHccTTTccTGGGTccccTTcTTHHHHcccTTHHHHHHHHHHHHEEccTTcEEEccTTHHHHHHHHHcHHHHHHHHHHHHHHHccccccccccEEEEEEEEcccccccEEETTEE#ccHHHHHHHHHHHHT##### DISOP:02AL 1-2| PSIPRED ccccEEEEEEccccccccccEEEEEEEcccHHHHcccEEEEEHHcccccccccccccccccccEEEEEEEEEEEEEEEEEccccEEEccccEEEEEcccEEEEEEccccccccEEEEEEEEEccHHHcccccHHHHccccccccEEccccEEEEEEcccccccccEEEccccEEEEEEEEccccEEEEEcccccEEEEEEEEEEEEEccccccEEccccEEEEccccEEEEEEccccEEEEEccccccccEEEEcccEEccHHHHHHHHHHHHHccccc //