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Candidatus Pelagibacter ubique HTCC1062 (pubi0)
Gene : AAZ20970.1
DDBJ      :             ABC transporter ATP-binding protein
Swiss-Prot:             

Homologs  Archaea  68/68 : Bacteria  908/915 : Eukaryota  197/199 : Viruses  1/175   --->[See Alignment]
c.37.1f.37.1
:579 amino acids
:PSIPRED
:DISOPRED
:BLT:PDB   78->575 2hydA PDBj 3e-88 37.0 %
:RPS:PDB   6->576 3b60A PDBj 1e-67 27.5 %
:RPS:SCOP  6->318 2hydA2  f.37.1.1 * 1e-45 20.2 %
:RPS:SCOP  339->578 1b0uA  c.37.1.12 * 2e-40 26.0 %
:HMM:SCOP  1->327 1pf4A2 f.37.1.1 * 9.1e-65 28.0 %
:HMM:SCOP  318->560 1pf4A1 c.37.1.12 * 8.2e-63 30.9 %
:RPS:PFM   77->287 PF00664 * ABC_membrane 2e-28 28.4 %
:RPS:PFM   380->505 PF00005 * ABC_tran 4e-12 38.0 %
:RPS:PFM   477->545 PF02463 * SMC_N 4e-08 39.1 %
:HMM:PFM   22->292 PF00664 * ABC_membrane 3.3e-39 21.8 271/275  
:HMM:PFM   380->505 PF00005 * ABC_tran 5.9e-24 33.3 114/118  
:HMM:PFM   347->397 PF03193 * DUF258 1.9e-07 26.0 50/161  
:BLT:SWISS 5->579 MSBA_SYNAS e-111 36.7 %
:PROS 477->491|PS00211|ABC_TRANSPORTER_1
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ20970.1 GT:GENE AAZ20970.1 GT:PRODUCT ABC transporter ATP-binding protein GT:DATABASE GIB00256CH01 GT:ORG pubi0 GB:ACCESSION GIB00256CH01 GB:LOCATION 150774..152513 GB:FROM 150774 GB:TO 152513 GB:DIRECTION + GB:PRODUCT ABC transporter ATP-binding protein GB:PROTEIN_ID AAZ20970.1 GB:DB_XREF GI:71061967 LENGTH 579 SQ:AASEQ MNNSEIYKRLYKDYSKKYINKILISVFFGVLVAASTSAIAWLLDPAIKKIFVEKDQSLIIVIPLLIIVAFTIKGFALYFAKAIMIKVAEEIKKILQSQMVKSLIKADTQLIDQKHSGKFISNLTYDVTHITTLLSTAVLNLFKDSLTLFGLLFVMFYQNWKLSLIAIIMIPIAGLASKTLGKRMGKVVTEAQEKSGFLNTHLIELFKNHKLVKIFQREEYESKRTDEHLDQLKDKNIKINTVYVRMSPIMETLTGIMIAILIFYSGKLALKSEIEIGNFFSFLAAMMLAYQPVRALSTINITLKQGLSAANRILPIIDHKNTIIDLDDSKDLNITDASIKFNKLNFKYNSNEENVLKNINIDIAGGKMTSLVGHSGSGKSTILNLIPRFYDAQSGDILIDNQSIYKVKIKSLRDKISLVSQDTTLFDDTIKNNIKYAKDNVSDEEVISAAKFSYANEFIEQLPNKYETIIGENGIRLSGGEKQRLSIARAMIKKSPIILLDEATSSLDSETESKIQDALKILTKDKTTIVIAHRLSTILSSDQIYIIDSGNVVANGKHDELLNNSELYKNFYEKQIRKE GT:EXON 1|1-579:0| BL:SWS:NREP 1 BL:SWS:REP 5->579|MSBA_SYNAS|e-111|36.7|572/601| PROS 477->491|PS00211|ABC_TRANSPORTER_1|PDOC00185| TM:NTM 2 TM:REGION 21->43| TM:REGION 59->81| SEG 58->68|liiviplliiv| BL:PDB:NREP 1 BL:PDB:REP 78->575|2hydA|3e-88|37.0|492/578| RP:PDB:NREP 1 RP:PDB:REP 6->576|3b60A|1e-67|27.5|568/572| RP:PFM:NREP 3 RP:PFM:REP 77->287|PF00664|2e-28|28.4|211/274|ABC_membrane| RP:PFM:REP 380->505|PF00005|4e-12|38.0|121/123|ABC_tran| RP:PFM:REP 477->545|PF02463|4e-08|39.1|69/536|SMC_N| HM:PFM:NREP 3 HM:PFM:REP 22->292|PF00664|3.3e-39|21.8|271/275|ABC_membrane| HM:PFM:REP 380->505|PF00005|5.9e-24|33.3|114/118|ABC_tran| HM:PFM:REP 347->397|PF03193|1.9e-07|26.0|50/161|DUF258| GO:PFM:NREP 9 GO:PFM GO:0005524|"GO:ATP binding"|PF00664|IPR001140| GO:PFM GO:0006810|"GO:transport"|PF00664|IPR001140| GO:PFM GO:0016021|"GO:integral to membrane"|PF00664|IPR001140| GO:PFM GO:0042626|"GO:ATPase activity, coupled to transmembrane movement of substances"|PF00664|IPR001140| GO:PFM GO:0055085|"GO:transmembrane transport"|PF00664|IPR001140| GO:PFM GO:0005524|"GO:ATP binding"|PF00005|IPR003439| GO:PFM GO:0016887|"GO:ATPase activity"|PF00005|IPR003439| GO:PFM GO:0005524|"GO:ATP binding"|PF02463|IPR003395| GO:PFM GO:0005694|"GO:chromosome"|PF02463|IPR003395| RP:SCP:NREP 2 RP:SCP:REP 6->318|2hydA2|1e-45|20.2|312/323|f.37.1.1| RP:SCP:REP 339->578|1b0uA|2e-40|26.0|235/258|c.37.1.12| HM:SCP:REP 1->327|1pf4A2|9.1e-65|28.0|311/311|f.37.1.1|1/1|ABC transporter transmembrane region| HM:SCP:REP 318->560|1pf4A1|8.2e-63|30.9|243/244|c.37.1.12|1/1|P-loop containing nucleoside triphosphate hydrolases| OP:NHOMO 41134 OP:NHOMOORG 1174 OP:PATTERN IIF5HC9EPRPNQLPHVAFCBFBObFHOTDMFIDACA8FEGDBPPNLaFN*mV5GPHDJEKNFAQ159 IMU9*XTRiijORMMHJGG-GR66PsGGGGGIRPQPh*tsAXJnadZTbLIEpkkFIZ99YaQboQgun*RUSRRoXUgI*dNDACAERSNJ6JBCJ--FDRJGGWNUFN55555559998888CNKHRTLHPQSNKQQYZFEErIfZijWWdJLJKMEJHJFRcOXy**ULNHJLMKJJMGLKJMCCmdAQVm********u********uuuv***Wdg**inuuvtut**WkkljlihjjkkkjhcgcZj*oTbx*dPibspoPQ**bXRYklikloqu*ws**wyszxupoxyptteecbcfhhfffcd*nrmmmrqtko*w*********j*ko***dihg*sgz*ihmMA**ohRYdZOOlgmiJXdJHNLIIEILIJNRH***QKVqmr*itsptupwpmq*-UWuTRyVm**IB*************tIFClt*oenq*p*MLMMMMMMVHNEHVJe666665557679A9BC7BAA9BBAB95A6KB9E7Bh*wbsitxy*nYbbcZkj**khjjSgtj*jgmZBJZZThLRUSie*p**QXQCNFJXGDGFEFDFJMHNSOWj*FdMbXOSkMLNETSSQKOWLUDEHDaYKjPKIPEKJKLJFBADDDDDDDGMFFHFDaWkRdKUCQHoKSUWRJOWRQQRNWWVTVS5-FAJDB332222xg*zNromrqsnsrsjl-qlmknkoknnqslhjliii*****lhYdkaeeeefefdgfged*gfhjjhiN5wz*****z****44GC8C989JKLKCAoY*XXXVaVENRONPNPaIKMLKCPDHVYSZbZZj*o*cotjiQvyyEDDBEFEDDHbmkxghhhguxtprGHLCHDCIIKBBBB46FTLKGHHJ88767768*5ZDBBBC-BCE9GECOOLDDNCHCAA9UYrTRW*XiWAMG 9887thN-kJB8YjXPRWLSWdZlZqaMMHIJKXYTJSQPQOMHHGYUZjhkunTQYOQNMMMGIBCB2KE7GFMGI2KKHHGELL8B-XtHRUUVJJJMGBLUUJ7Q***gpb*ryPMMMOaN**M*J**r1*U*PMQOkRR*jITNPIiKG*OdZZtRu*W*bfU*en*vo*gEMJH*BEDKKxpq*N**PR****b ------------------------------------------------------------------------------------------------------------------------------1------------------------------------------------ DISOP:02AL 321-333, 577-579| PSIPRED cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccEEEEEEEEEEccccccHHHccccEEEcccEEEEEEccccccHHHHHHHHHHcccccccEEEEccEEcccccHHHHHHHccccccccEEEcccHHHHHHHccccccHHHHHHHHHHHHHHHHHHHccHHccccccccccccccHHHHHHHHHHHHHHcccEEEEHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEcHHHHHHHccEEEEEEccEEEEEccHHHHHHcccHHHHHHHHHHccc //