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Candidatus Pelagibacter ubique HTCC1062 (pubi0)
Gene : AAZ21004.1
DDBJ      :             Xanthine/uracil/vitamin C permease family protein
Swiss-Prot:             

Homologs  Archaea  24/68 : Bacteria  595/915 : Eukaryota  59/199 : Viruses  0/175   --->[See Alignment]
:436 amino acids
:PSIPRED
:RPS:PFM   16->398 PF00860 * Xan_ur_permease 7e-30 33.2 %
:HMM:PFM   18->398 PF00860 * Xan_ur_permease 8.2e-52 23.1 372/389  
:BLT:SWISS 2->433 Y326_METJA 2e-70 34.2 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ21004.1 GT:GENE AAZ21004.1 GT:PRODUCT Xanthine/uracil/vitamin C permease family protein GT:DATABASE GIB00256CH01 GT:ORG pubi0 GB:ACCESSION GIB00256CH01 GB:LOCATION 184378..185688 GB:FROM 184378 GB:TO 185688 GB:DIRECTION + GB:PRODUCT Xanthine/uracil/vitamin C permease family protein GB:PROTEIN_ID AAZ21004.1 GB:DB_XREF GI:71062001 LENGTH 436 SQ:AASEQ MLEKYFDYKKHKTDFKTEVIAGVTTFLTMAYIMFLNPFILSGEFAGPEKGFFEFGAVYTATIVATALACFIMAFYGKTWPIGLAPGMGINAFVAFGVCAGMGYTPQEALGAVLVAGVLFLIISLTPIRAWLINSIPRSLKLGIGAGIGLFLAIIGLQIMEVVVDNPVTLVQLGDLSDPLVLLGCAAFILMVVLEKMKVKGNIIIGILLFSIIAWATGLAKFNGIASSPPPMTYLFDFDLSAALTAGMTTVVFTLLFVDFFDTAGTLTSVANVAGKVDKNGKVKDIEKAMMADSVGTVAGAMMGTTTVTSYVESGAGVKAGGKTGMTSLVIGLLFLACIFFAPLATSLPKQIDGAALVFVSVLFVRNITDIEWDDIGEAAPAILAMIAMPLTYSISNGIALAFVSYALIRLFTGKFSSTSPAIWIIAILSVVSFAVA GT:EXON 1|1-436:0| BL:SWS:NREP 1 BL:SWS:REP 2->433|Y326_METJA|2e-70|34.2|424/436| TM:NTM 13 TM:REGION 18->40| TM:REGION 52->74| TM:REGION 81->103| TM:REGION 108->130| TM:REGION 139->161| TM:REGION 168->190| TM:REGION 199->221| TM:REGION 245->267| TM:REGION 291->313| TM:REGION 324->346| TM:REGION 349->371| TM:REGION 382->404| TM:REGION 414->436| SEG 108->118|algavlvagvl| SEG 139->158|lklgigagiglflaiiglqi| SEG 202->212|iiigillfsii| SEG 248->262|ttvvftllfvdffdt| SEG 294->308|vgtvagammgtttvt| SEG 378->390|aapailamiampl| RP:PFM:NREP 1 RP:PFM:REP 16->398|PF00860|7e-30|33.2|374/381|Xan_ur_permease| HM:PFM:NREP 1 HM:PFM:REP 18->398|PF00860|8.2e-52|23.1|372/389|Xan_ur_permease| GO:PFM:NREP 4 GO:PFM GO:0005215|"GO:transporter activity"|PF00860|IPR006043| GO:PFM GO:0006810|"GO:transport"|PF00860|IPR006043| GO:PFM GO:0016020|"GO:membrane"|PF00860|IPR006043| GO:PFM GO:0055085|"GO:transmembrane transport"|PF00860|IPR006043| OP:NHOMO 1102 OP:NHOMOORG 678 OP:PATTERN -------1---------1-------11111111--11-11111-----------1111111------- -11-11111111111------1---1------11111111----1111111132211---11111113231111111111111-----------11-----------1-----------------11111111111--------11--11---------------1----1-------------11--11--1244444444344444412222244421212223333332211111111111111111111242111113332211114222221111111111111111111111111111111111111111111111111223333333353512114333121111111-11121-11111111131---111--------11---------11121111111-11-11111--1-------1---221------1-------11111111---1-11------------------------------1----1111112222222111122222222122222222--222-----1---1--1-----121111111---------11---1-111--1-1111-111111-----111-1111111-1111111-11-1--3--11-1-1111222212622222242222--1----------22422224554444444-3444444444344444442333221122222222222222222313233321-222222222222---------1111---21222222111-122221112111-111-22222222222222111-111111111122311111112321111111----------1------22212-2-1-1----1---------------1----1-11111111-1- -----------------321111111111-1111--1111111---2322-34212221222-------------------------1-1-4-1-1-------211---------------------------------------------------------3---------1--1------23111522-1-1---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PSIPRED ccHHHHcHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHccccEEEcccccHHcccccccHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHcccccccHHHHHHHHHHHHHHcccHHHcccHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHc //