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Candidatus Pelagibacter ubique HTCC1062 (pubi0)
Gene : AAZ21086.1
DDBJ      :             mannitol transporter
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  102/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
:194 amino acids
:PSIPRED
:DISOPRED
:RPS:PFM   33->157 PF04290 * DctQ 1e-10 30.0 %
:HMM:PFM   26->159 PF04290 * DctQ 8.5e-26 21.4 131/133  
:BLT:SWISS 90->127 ATRN1_MOUSE 7e-04 50.0 %
:TM

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ21086.1 GT:GENE AAZ21086.1 GT:PRODUCT mannitol transporter GT:DATABASE GIB00256CH01 GT:ORG pubi0 GB:ACCESSION GIB00256CH01 GB:LOCATION complement(266479..267063) GB:FROM 266479 GB:TO 267063 GB:DIRECTION - GB:PRODUCT mannitol transporter GB:NOTE small chain GB:PROTEIN_ID AAZ21086.1 GB:DB_XREF GI:71062083 LENGTH 194 SQ:AASEQ MRAYIKLADTLSTSIGKAFSWCIVILMGGTCYEVMMAYVFNKPTLWNFDFSMQMYGAILMMSGAYCLATESHVRGDVIYRLFKPRTQGYIDLVLYFIFFFPGVVSLAFYGYEYAALAWKIKETSWSSPAQINIYMVKSLIPAAGVFLVIQGIAEVFRAIICIKTGHWPARMVVAEETEQILMRTAQDEDQKDVI GT:EXON 1|1-194:0| BL:SWS:NREP 1 BL:SWS:REP 90->127|ATRN1_MOUSE|7e-04|50.0|34/1378| TM:NTM 4 TM:REGION 15->37| TM:REGION 47->69| TM:REGION 88->109| TM:REGION 141->163| RP:PFM:NREP 1 RP:PFM:REP 33->157|PF04290|1e-10|30.0|120/133|DctQ| HM:PFM:NREP 1 HM:PFM:REP 26->159|PF04290|8.5e-26|21.4|131/133|DctQ| OP:NHOMO 131 OP:NHOMOORG 102 OP:PATTERN -------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------1-------------------------1-111--------1----------------1--11---1-----1-------22-------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-----------------------------111-1-11112--------------------211-111111221122-11-1--111113-2-------------12------------------------------2------1112------------------------211111---21-11-11-1-221--------------1--11--4---------------------1111-----------------------------------113-1-21-----------------2------1--------------------------------------------------------------------------------------------1----------12-3--------------------------1--------2-----------------1---1-1--1-1111----------------1-------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 182-194| PSIPRED cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHccHHHHccc //