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Candidatus Pelagibacter ubique HTCC1062 (pubi0)
Gene : AAZ21095.1
DDBJ      :             major facilitator superfamily transporter
Swiss-Prot:             

Homologs  Archaea  4/68 : Bacteria  71/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
f.38.1
:405 amino acids
:PSIPRED
:DISOPRED
:HMM:SCOP  1->401 1pw4A_ f.38.1.1 * 3.8e-51 24.4 %
:HMM:PFM   19->356 PF07690 * MFS_1 2e-31 22.4 326/353  
:BLT:SWISS 68->168 NANT_YERPY 3e-06 23.8 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ21095.1 GT:GENE AAZ21095.1 GT:PRODUCT major facilitator superfamily transporter GT:DATABASE GIB00256CH01 GT:ORG pubi0 GB:ACCESSION GIB00256CH01 GB:LOCATION complement(276222..277439) GB:FROM 276222 GB:TO 277439 GB:DIRECTION - GB:PRODUCT major facilitator superfamily transporter GB:PROTEIN_ID AAZ21095.1 GB:DB_XREF GI:71062092 LENGTH 405 SQ:AASEQ MNKVILPKQKAITIFLVFALSYYISNLLRAITATISPNLISEFDLSAGDLGLLGGGYFLGFAAVQIPLGYLLDNKGPKKIVSYFLLIAVLGMISFSLSENFITLLISRILIGIGVGACLMGPLTAYRIWYQDETQQRANSWMLMVGAIGMLSSSLPVQFFLPIIGWRMIFITLALLTIFCIILIIFFIPNWNKANIQSNSNDNGSLKEIWNNSFFKSLVPMGFFNYGGLFAIQTLWAGPWMIKVSGYTPEQSANGLFLIYFSLLISFLSWGYLVPKISKNVSDAIRLLKFGAPLNLIVLAFIIYLGPKAGAYHWAFFAVSSVFLSLTQPAVGMAFSLSNAGKALTSFNLLLFIGAFALQWIIGVIIDLTMNLGYSEISGFRFAMIFFLLTSFFSYLFFLIRNYKN GT:EXON 1|1-405:0| BL:SWS:NREP 1 BL:SWS:REP 68->168|NANT_YERPY|3e-06|23.8|101/510| TM:NTM 12 TM:REGION 4->26| TM:REGION 46->68| TM:REGION 80->102| TM:REGION 105->127| TM:REGION 141->163| TM:REGION 169->191| TM:REGION 221->243| TM:REGION 254->276| TM:REGION 281->303| TM:REGION 315->337| TM:REGION 347->369| TM:REGION 380->402| SEG 43->63|fdlsagdlgllgggyflgfaa| SEG 169->188|ifitlalltifciiliiffi| SEG 256->269|lfliyfsllisfls| SEG 386->399|fflltsffsylffl| HM:PFM:NREP 1 HM:PFM:REP 19->356|PF07690|2e-31|22.4|326/353|MFS_1| HM:SCP:REP 1->401|1pw4A_|3.8e-51|24.4|386/447|f.38.1.1|1/1|MFS general substrate transporter| OP:NHOMO 81 OP:NHOMOORG 75 OP:PATTERN -----------------------1--------------111--------------------------- -------------------------------------------------11-------------------------------------------------------------------------1--------------11---------------------------------------------11---------------------------------1---------------------------------------------------------------------------------------------------------------------1----------------11--1--1-----------------------1-2------------------------------1--------------------1--------------------1----------------------------1-11----------1----1111111111111111-111111--------11-11112--1-----------------11--11------------1-1111---------1-------------------------------------------------------------1----------------------------------------------------------------------------------------------------2222------------------------------1---------------111------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-2, 191-205| PSIPRED cccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc //