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Candidatus Pelagibacter ubique HTCC1062 (pubi0)
Gene : AAZ21129.1
DDBJ      :             Family of unknown function YGGT
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  82/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
:96 amino acids
:PSIPRED
:RPS:PFM   8->89 PF02325 * YGGT 5e-05 37.8 %
:HMM:PFM   10->87 PF02325 * YGGT 8e-22 35.7 70/75  
:BLT:SWISS 1->65 YR5A_AGRT5 5e-13 46.2 %
:TM

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ21129.1 GT:GENE AAZ21129.1 GT:PRODUCT Family of unknown function YGGT GT:DATABASE GIB00256CH01 GT:ORG pubi0 GB:ACCESSION GIB00256CH01 GB:LOCATION complement(304560..304850) GB:FROM 304560 GB:TO 304850 GB:DIRECTION - GB:PRODUCT Family of unknown function YGGT GB:NOTE similar to Rhodopseudomonas palustris CGA009 gi|39647338|emb|CAE25859.1 GB:PROTEIN_ID AAZ21129.1 GB:DB_XREF GI:71062126 LENGTH 96 SQ:AASEQ MIAIFYLVLQILKLYSYVVIANVVISWLVAFNVLNTQNRFVYSILEVTYRLTNPALNKIRSFLPNLGSIDISPVILLLLIWFIEMCMKLYIAPMIF GT:EXON 1|1-96:0| BL:SWS:NREP 1 BL:SWS:REP 1->65|YR5A_AGRT5|5e-13|46.2|65/106| TM:NTM 2 TM:REGION 8->30| TM:REGION 71->93| RP:PFM:NREP 1 RP:PFM:REP 8->89|PF02325|5e-05|37.8|74/75|YGGT| HM:PFM:NREP 1 HM:PFM:REP 10->87|PF02325|8e-22|35.7|70/75|YGGT| GO:PFM:NREP 1 GO:PFM GO:0016020|"GO:membrane"|PF02325|IPR003425| OP:NHOMO 82 OP:NHOMOORG 82 OP:PATTERN -------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1111111111---111--1--1111-1111111-111111111-111--111111111111-111-1111--1---------111-111111--111-----------------1-111--111--------------------------------------------------------------------------------------111---1-1--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1----------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PSIPRED ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHcc //