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Candidatus Pelagibacter ubique HTCC1062 (pubi0)
Gene : AAZ21159.1
DDBJ      :             Putative translocase transmembrane protein with Tim44 Pfam domain
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  95/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
d.17.4
:197 amino acids
:PSIPRED
:DISOPRED
:RPS:SCOP  54->195 2cw9A1  d.17.4.13 * 7e-23 18.2 %
:HMM:SCOP  64->196 2cw9A1 d.17.4.13 * 1.5e-32 35.1 %
:RPS:PFM   66->192 PF04280 * Tim44 2e-17 32.0 %
:HMM:PFM   63->196 PF04280 * Tim44 2.4e-33 34.8 132/147  
:BLT:SWISS 56->188 TIM44_CAEEL 8e-06 25.8 %
:TM

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ21159.1 GT:GENE AAZ21159.1 GT:PRODUCT Putative translocase transmembrane protein with Tim44 Pfam domain GT:DATABASE GIB00256CH01 GT:ORG pubi0 GB:ACCESSION GIB00256CH01 GB:LOCATION complement(330542..331135) GB:FROM 330542 GB:TO 331135 GB:DIRECTION - GB:PRODUCT Putative translocase transmembrane protein with Tim44 Pfam domain GB:PROTEIN_ID AAZ21159.1 GB:DB_XREF GI:71062156 LENGTH 197 SQ:AASEQ MSYSFEYIDIILLAMIAGFIFLRLRGILGKKTGFEGKIPPQFEKEFQKTNITPKPVSENFDEVSQKEFLKGAKIAYETIITDFSDSDNKLIASKPLLSKKIYDQFKEALEDRANKGHFAEITFIGIKSAVIKTHKKIEDSLEVTVDFVSEIITCIKDKDKNIVSGDSDKIKTVYDTWVFSKDIKSSNPNWLLINTIT GT:EXON 1|1-197:0| BL:SWS:NREP 1 BL:SWS:REP 56->188|TIM44_CAEEL|8e-06|25.8|128/425| TM:NTM 1 TM:REGION 2->23| RP:PFM:NREP 1 RP:PFM:REP 66->192|PF04280|2e-17|32.0|125/147|Tim44| HM:PFM:NREP 1 HM:PFM:REP 63->196|PF04280|2.4e-33|34.8|132/147|Tim44| GO:PFM:NREP 3 GO:PFM GO:0005744|"GO:mitochondrial inner membrane presequence translocase complex"|PF04280|IPR007379| GO:PFM GO:0006886|"GO:intracellular protein transport"|PF04280|IPR007379| GO:PFM GO:0015450|"GO:P-P-bond-hydrolysis-driven protein transmembrane transporter activity"|PF04280|IPR007379| RP:SCP:NREP 1 RP:SCP:REP 54->195|2cw9A1|7e-23|18.2|137/182|d.17.4.13| HM:SCP:REP 64->196|2cw9A1|1.5e-32|35.1|131/0|d.17.4.13|1/1|NTF2-like| OP:NHOMO 95 OP:NHOMOORG 95 OP:PATTERN -------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------111111111111111111111111111111111-111111111111111111111111111-11111111111--------1----1111111111111---------------1111111111------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-2, 29-61| PSIPRED ccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHcccEEEEEEEEEEEEEEEEEEEcccEEEEEEEEEEEEEEEEEcccccEEEccccccEEEEEEEEEEEccccccccEEEEEEEc //