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Candidatus Pelagibacter ubique HTCC1062 (pubi0)
Gene : AAZ21171.1
DDBJ      :             Predicted O-linked N-acetylglucosamine transferase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  137/915 : Eukaryota  83/199 : Viruses  0/175   --->[See Alignment]
a.118.8d.198.1
:557 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   204->494 2vsnB PDBj 8e-21 26.8 %
:RPS:PDB   17->189 2cfuA PDBj 2e-08 3.7 %
:RPS:SCOP  23->148 1ihgA1  a.118.8.1 * 3e-06 15.5 %
:RPS:SCOP  204->284 1jyaA  d.198.1.1 * 2e-04 15.2 %
:HMM:SCOP  45->148 1iygA_ a.118.8.1 * 4.4e-07 15.4 %
:HMM:PFM   117->146 PF07719 * TPR_2 0.00062 16.7 30/34  
:BLT:SWISS 61->548 SPY_PETHY 6e-43 26.7 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ21171.1 GT:GENE AAZ21171.1 GT:PRODUCT Predicted O-linked N-acetylglucosamine transferase GT:DATABASE GIB00256CH01 GT:ORG pubi0 GB:ACCESSION GIB00256CH01 GB:LOCATION 339853..341526 GB:FROM 339853 GB:TO 341526 GB:DIRECTION + GB:PRODUCT Predicted O-linked N-acetylglucosamine transferase GB:NOTE SPINDLY family GB:PROTEIN_ID AAZ21171.1 GB:DB_XREF GI:71062168 LENGTH 557 SQ:AASEQ MSIKPENINLNKIFIKYLNEKQYSKLQLHYEKLGKTEKQLPAIIFYYACAITLNPSSNIKNLKHAHNLFEMLYVNNRHDLQLLCNMIELSFRTQEFKVVLPYVEEAYKINQSDERLLLGLSKIHLYLANLKESIKYYKILFKINPKSKINRDEFLTSLNYASGITQEYYLSECKNYLKLLETNKDLEDYNFNFKNLKNNKIKIGFLSSDFKTHPVSFFLKGLLLNFNKDKFEISLISNLHKSHYDNITDELKLLTKNWININSLSDSEATNLLRSFELDILIDLCGFFRGNRFQVISNRAAKIQACWLGYNNTTGIKNMDYLIADHNLIKKEEEKLYSEKVLFLPKIWNAMTPSNILPEIQKNNSIFTYASFNNFHKISDDTIDVWSKILNNSNSQIILKNPMPSSIVGEELKLNLLKKFIARGVEKKKILFINRKKDFQDHLGLYNNVDVALDTFPYPGVTTTFDAVLMGVPVLTMKGHNLNSRCGESININLQMQNFIAENKDDYFNKALSLQKEKNILQNFGKNLREKVLKSSLFDTKDFTKSFEKIIQKIISK GT:EXON 1|1-557:0| BL:SWS:NREP 1 BL:SWS:REP 61->548|SPY_PETHY|6e-43|26.7|479/932| SEG 190->203|nfnfknlknnkiki| SEG 217->231|fflkglllnfnkdkf| BL:PDB:NREP 1 BL:PDB:REP 204->494|2vsnB|8e-21|26.8|284/534| RP:PDB:NREP 1 RP:PDB:REP 17->189|2cfuA|2e-08|3.7|163/627| HM:PFM:NREP 1 HM:PFM:REP 117->146|PF07719|0.00062|16.7|30/34|TPR_2| RP:SCP:NREP 2 RP:SCP:REP 23->148|1ihgA1|3e-06|15.5|116/169|a.118.8.1| RP:SCP:REP 204->284|1jyaA|2e-04|15.2|79/117|d.198.1.1| HM:SCP:REP 45->148|1iygA_|4.4e-07|15.4|104/133|a.118.8.1|1/1|TPR-like| OP:NHOMO 376 OP:NHOMOORG 220 OP:PATTERN -------------------------------------------------------------------- -1-----------------------------------------------------------------------------------------------------------------------------1-2---2------------1122116121112--2--11-4224---31--1-1-1--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------332-----21456---1--13------------11111-1-----211A111111--13------2-11-2---------1----6-2-----------------------------1--1------141111411111--141111113-111-114---2----3---11--2-232-1-------1---11---1--1--1-----2123-1--1-----1---------------------------------------------------------------1--------11-1-1----------------------------------11------------------------------------------------------1--1--------------------------1------------------------------------------1-11111111------5------------------------------------------------------1- ---1121-------------------------------------------------------------------------------------------------1--1--211113-11-1-1121-11382-1121-1111A411111111-1111112451111131121211--117111124115-32-2-4222 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 464 STR:RPRED 83.3 SQ:SECSTR #########HHHccccccGGGTccccHHHHHHHHHHHTTcHHHHHHHHHHHHcHHHHHTTcHHHHHHHHHHHHHHcTTcHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHccccccccHHHHHHccHHHHHHHHHHHccHHHHTTccEEEEEEETHHHHHTTTEEEEEEEETTEEEEEETcccT##############EEEEccccccHHHHHHHHHHHHHHHHcTTEEE#EEEEcccccccHHHHHHHTTcEEEcTTccHHHHHHHHHHTTccEEEEcccccccccHHHHHTccccEEEEccccccccccTTccEEEEETTTccGGGGGGcccEEEEEccccccccTTccccccccTGGGcEEEEcccGGGccHHHHHHHHHHHHHcTTcEEEEEcccT#####THHHHHHHHHHHTTccGGGEEEE#ccccHHHHHHHGGGccEEEccccccccHHHHHHHHHTccEEccccccGGGcHHHHHHHHH############################################################### PSIPRED cccccccccHHHHHHHHHHHHccccHHHHHHHHHHHHccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHcccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHcccccHHHcccccccccccEEEEEEccccccHHHHHHHHHHHHcccccEEEEEEEccccccccHHHHHHHHHccccEEcccccHHHHHHHHHHccccEEEEccccccccHHHHHHcccccEEEEEEccccccccccccEEEEccccccHHHHHHccccEEEccccccccccccccccccccccEEEEEEccccccccHHHHHHHHHHHHHcccEEEEEcccccccccHHHHHHHHHHHHHccccHHHEEEccccccHHHHHHHHHcccEEEcccccccHHHHHHHHHHcccEEEcccHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHcc //