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Candidatus Pelagibacter ubique HTCC1062 (pubi0)
Gene : AAZ21175.1
DDBJ      :             ParA family ATPase for plasmid partitioning and other plasmid related functions
Swiss-Prot:             

Homologs  Archaea  37/68 : Bacteria  686/915 : Eukaryota  6/199 : Viruses  1/175   --->[See Alignment]
c.37.1
:264 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   4->258 1wcv1 PDBj 5e-52 46.4 %
:RPS:PDB   7->256 2afiP PDBj 2e-39 15.7 %
:RPS:SCOP  1->257 1cp2A  c.37.1.10 * 3e-44 20.4 %
:HMM:SCOP  1->258 1fp6A_ c.37.1.10 * 6.8e-64 35.2 %
:RPS:PFM   5->191 PF01656 * CbiA 5e-22 42.0 %
:HMM:PFM   4->225 PF01656 * CbiA 1e-45 36.2 188/194  
:BLT:SWISS 1->258 PARA_CAUCR 2e-73 52.9 %
:PROS 138->148|PS00435|PEROXIDASE_1

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ21175.1 GT:GENE AAZ21175.1 GT:PRODUCT ParA family ATPase for plasmid partitioning and other plasmid related functions GT:DATABASE GIB00256CH01 GT:ORG pubi0 GB:ACCESSION GIB00256CH01 GB:LOCATION 345604..346398 GB:FROM 345604 GB:TO 346398 GB:DIRECTION + GB:PRODUCT ParA family ATPase for plasmid partitioning and other plasmid related functions GB:PROTEIN_ID AAZ21175.1 GB:DB_XREF GI:71062172 LENGTH 264 SQ:AASEQ MQIISIINQKGGVGKTTTVINLAAGLAQHEKKVLVIDLDPQGNATTGLGLSNLEGSTDTIYGVLNGTRVISDVIRKTEFKNLDIITSNVDLSGLEVETADDSMRAFILKRELTAYLNDSRATYDYVLIDCPPSLSLLTVMALVSSHSLLVPLQTEFFALEGLTQLMKTIERIKVNLNPELKIRGILLTMFDKRNKLSTQVEKEARDYFNEKVYLTVIPRNVRLSEAPSHGMPVLMYDKSCPGSKSYFNFTDEFINQEQTIGSAA GT:EXON 1|1-264:0| BL:SWS:NREP 1 BL:SWS:REP 1->258|PARA_CAUCR|2e-73|52.9|255/267| PROS 138->148|PS00435|PEROXIDASE_1|PDOC00394| BL:PDB:NREP 1 BL:PDB:REP 4->258|1wcv1|5e-52|46.4|239/243| RP:PDB:NREP 1 RP:PDB:REP 7->256|2afiP|2e-39|15.7|242/267| RP:PFM:NREP 1 RP:PFM:REP 5->191|PF01656|5e-22|42.0|157/178|CbiA| HM:PFM:NREP 1 HM:PFM:REP 4->225|PF01656|1e-45|36.2|188/194|CbiA| RP:SCP:NREP 1 RP:SCP:REP 1->257|1cp2A|3e-44|20.4|245/269|c.37.1.10| HM:SCP:REP 1->258|1fp6A_|6.8e-64|35.2|244/0|c.37.1.10|1/1|P-loop containing nucleoside triphosphate hydrolases| OP:NHOMO 1544 OP:NHOMOORG 730 OP:PATTERN -------1111111111-------78612151112-1------11-11---1--12222241-1---1 2111222222222243335-3422433333333333255623344232333233422233223234324222222222113111-1--222412111--111111212312122111112111122222222232432233---225352443-211------421-5753------------4242211121112122112111111111111122312211--211111143------------------15121321-11112111114-331-1------1------------------------1---1-----1---132221112111223221112111221212212111214121111111--222411211111111134121212122222222226-234127125311444895496754124213133112111222222222112132211-11111--1111111131111111-111132111111233322221111224411111122313331111132121121331223121322121111123142134551322372332511111123334334411211111111111122122111121113242363222412242222232222322222---2443-------1-2-11-11----11--1---1-----11-------21211--1-----1-1---------------------------1-----122212221124422------------2--22333221112423322334333553335---------14345333334333322233332222112--225544449G98327111----------1-11-----11---------1-----131 -----------------------------------------------------------------------------------------------------------------------------------------------1--------------1-----------1---1-------------4--------1- ----------------------1-------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 258 STR:RPRED 97.7 SQ:SECSTR ccEEEEEEEcTTccHHHHHHHHHHHHHHHTccEEEEEccTTccTTHHHTccccccHHHHHHHHccTTcccHHHHcEEcGGGcEEEEcccccTTccccTHHHHHHHHHHHHHHHHHTTcccccccEEEEEEEcccccTTTTHHHHTTcccEEEEEEcccHHHHHHHHHHHHHHHHTTTcccEEEEEEEEccccTTcHHHHHHHHHHHHHTccEcEEEEcccHHHHHHHHTTccHHHHccccHHHHHHHHHHHHHHHcHH###### DISOP:02AL 261-264| PSIPRED cEEEEEEcccccccHHHHHHHHHHHHHHccccEEEEEcccccccHHHcccccccccHHHHHHHHcccccHHHHHHccccccEEEEEccccHHHHHHHHcccccHHHHHHHHHHHHHHHHHHcccEEEEEccccccHHHHHHHHHHcEEEEEEcccHHHHHHHHHHHHHHHHHHHHcccccEEEEEEEEEccccccHHHHHHHHHHHHHccccEEEEccccHHHHHHHHccccEEEEccccHHHHHHHHHHHHHHHHHHHHHHcc //