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Candidatus Pelagibacter ubique HTCC1062 (pubi0)
Gene : AAZ21277.1
DDBJ      :             hypothetical transmembrane protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  1/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
:551 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   126->433 1ddqC PDBj 1e-04 7.5 %
:HMM:PFM   109->175 PF02758 * PAAD_DAPIN 0.00087 20.3 64/83  
:BLT:SWISS 12->127 ETK_ECOLI 3e-04 24.3 %
:BLT:SWISS 251->393 PP156_ARATH 2e-05 27.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ21277.1 GT:GENE AAZ21277.1 GT:PRODUCT hypothetical transmembrane protein GT:DATABASE GIB00256CH01 GT:ORG pubi0 GB:ACCESSION GIB00256CH01 GB:LOCATION 450066..451721 GB:FROM 450066 GB:TO 451721 GB:DIRECTION + GB:PRODUCT hypothetical transmembrane protein GB:PROTEIN_ID AAZ21277.1 GB:DB_XREF GI:71062274 LENGTH 551 SQ:AASEQ MGEKKPKENLILTEDELEKNIPQNSIYDMQSQKEGELSIEETQTLISKEKKLIGIYDPAENGLDINMWSNSNGDQILNIFKRIDKLELSRDAEEILDVLLLTNAHYPEMNISKEQFLEIKSKWLIKRSNFDLIEKYLLNNEIINEHPKLTKHLVDHYLSQSDVEKACEIFSKINEPIQDLYLSKFNIYCLINNNKRDEAQLLIDLQLELGIADKFFNKKIDYLMGYNTEPATEVSEKTILDFHLSHRTNPEFKFEPKNTTSRQIWKYLSTSNLLDDISDIELTDIEKITSIEKATHEGNYAEKELFELYKRFQFNINQLLNIKESTKVLSRIETRALIYQGILITTEIENKLQLMNALKNSFKNDGIENAFNIELKNFLKNIEENKVPSNFTTFYQDNLGNEETEQANIKINNKILHQSKLINYLKLEKSKNDPTKDINDFLKKIKKDKKYFFSKKDVILVETFKSDGVKILEKYDDLYQINDSEIPSDIQIFVNSGDMAAALLRIVEVIGQDSLNAIDEDTLYFIISTLNQLNADPLRNKILFKVLPLKV GT:EXON 1|1-551:0| BL:SWS:NREP 2 BL:SWS:REP 12->127|ETK_ECOLI|3e-04|24.3|111/726| BL:SWS:REP 251->393|PP156_ARATH|2e-05|27.0|137/743| SEG 436->457|kdindflkkikkdkkyffskkd| RP:PDB:NREP 1 RP:PDB:REP 126->433|1ddqC|1e-04|7.5|306/1112| HM:PFM:NREP 1 HM:PFM:REP 109->175|PF02758|0.00087|20.3|64/83|PAAD_DAPIN| OP:NHOMO 1 OP:NHOMOORG 1 OP:PATTERN -------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 306 STR:RPRED 55.5 SQ:SECSTR #############################################################################################################################ccccccccccccccTTGGGGcTHHHHHHcccccc##TTcccGGGTTHHHHHcccccccTTccccEEccccccEEccccccTTHHHHTTccccccEEcccccEEccccccccccccccccccccccccccTTcccccccccccccccccccccTTTTcccEEEccccTccccEEEcccccccccEEcccccccHHHHHHHHccccccccccccccccccTTTcTTTTTcccHHHHHHHHHHHccTTcccccccccTTTTTcccccccGGGcccccTTTGGGGTccccccccccccccccccccHHHHHH###################################################################################################################### DISOP:02AL 1-10| PSIPRED cccccccccEEEcHHHHHHcccHHHHHcccccccccEEEcccHHccccccHHEEEcccccccccHHHcccccHHHHHHHHHccccccccHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHcccHHHHHHHHHHcccccccHHHHHHHHHHHHHcccHHHHHHccccccccccccHHHHHHHHHHHHcccHHHHHHHHHHHHHHccccHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHcccccHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHccccccHHHHHHHHHHcccHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHcccHHHHHHHcccHHHHHHHHHHHHHccccHHHccHHHHHHHHHHHHHHcHHHHHHHHHHHHccccc //