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Candidatus Pelagibacter ubique HTCC1062 (pubi0)
Gene : AAZ21286.1
DDBJ      :             HAD-superfamily hydrolase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  142/915 : Eukaryota  63/199 : Viruses  0/175   --->[See Alignment]
c.108.1
:223 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   123->215 2hoqA PDBj 2e-07 28.3 %
:RPS:PDB   8->192 3cnhB PDBj 7e-14 10.9 %
:RPS:SCOP  8->186 1aq6A  c.108.1.1 * 4e-15 19.2 %
:HMM:SCOP  6->214 2g80A1 c.108.1.22 * 3.3e-33 31.7 %
:HMM:PFM   11->172 PF00702 * Hydrolase 1e-11 23.7 156/192  
:BLT:SWISS 5->183 YAI5_SCHPO 1e-14 30.1 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ21286.1 GT:GENE AAZ21286.1 GT:PRODUCT HAD-superfamily hydrolase GT:DATABASE GIB00256CH01 GT:ORG pubi0 GB:ACCESSION GIB00256CH01 GB:LOCATION complement(457569..458240) GB:FROM 457569 GB:TO 458240 GB:DIRECTION - GB:PRODUCT HAD-superfamily hydrolase GB:NOTE subfamily IA, variant 3 GB:PROTEIN_ID AAZ21286.1 GB:DB_XREF GI:71062283 LENGTH 223 SQ:AASEQ MKNLIDTKYWLFDLDNTLYSGQTKVFSEVDKKMSSFISKKFNVDLIKAREIQKKYFYEYGTTLSGLMSHDKIDPHEFLEFVHDIDISWLPKDEILREELIKIKEKKYIFTNGSHAHVENVTKQLGIDGLFDGAFDIVDANFIPKPKIEPYEKIVEKFELDPTKSILIEDIAHNLEQAKNLGMKTCWLENDEVFAKKDADKPYIDYKIKNLPSFLQEINILKAQ GT:EXON 1|1-223:0| BL:SWS:NREP 1 BL:SWS:REP 5->183|YAI5_SCHPO|1e-14|30.1|176/226| SEG 93->108|eilreelikikekkyi| BL:PDB:NREP 1 BL:PDB:REP 123->215|2hoqA|2e-07|28.3|92/237| RP:PDB:NREP 1 RP:PDB:REP 8->192|3cnhB|7e-14|10.9|175/191| HM:PFM:NREP 1 HM:PFM:REP 11->172|PF00702|1e-11|23.7|156/192|Hydrolase| RP:SCP:NREP 1 RP:SCP:REP 8->186|1aq6A|4e-15|19.2|177/245|c.108.1.1| HM:SCP:REP 6->214|2g80A1|3.3e-33|31.7|202/0|c.108.1.22|1/1|HAD-like| OP:NHOMO 215 OP:NHOMOORG 205 OP:PATTERN -------------------------------------------------------------------- -------------------------------------------------------------------------------------------------------------------------------------------11---1---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1111-----111111111111111111111111-11111111111-111111111111111111111111111-------------111-----------------------------1-1111111111111111111111111-11111111111--11111---------111-11111111-111---111----------------------1----------------------------------------------1---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------111111111---------------------------------------------------------------------------------------- ----11---------111-----1--11-1111--1-111111-11-11112111111-111----1---12---111111--1-----1111--1-----1-1-2----------------------------------------------------------------------11--1----111315--1----- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 215 STR:RPRED 96.4 SQ:SECSTR #######cEEEEcccTTTcccHHHHHccccHHHHHHHHHHHTccHHHHHHHHHHHHHHHHTTccHHHHHHHHTTTccccccHHHHHHHHccHHHHHHHHHHTTTcEEEEEcccHHHHHHHHHHHTGGGTccEEEcEEEHHHHccTTcHHHHHHHHHHTccGGGGEEEEccHHHHHHHHHTTEEEEcccHHHHccHHHHHTTcccEEEccTTHHHHHTTcccc# DISOP:02AL 1-2, 221-223| PSIPRED ccccccccEEEEEcccccccccHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHcccccccccHHHHHHHHHHcccEEEEEcccHHHHHHHHHHcccHHHccEEEEEccccccccccHHHHHHHHHHHcccHHHEEEEcccHHHHHHHHHHccEEEEEcccccccccccccccccEEEccHHHHHHHHHHHHcc //