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Candidatus Pelagibacter ubique HTCC1062 (pubi0)
Gene : AAZ21351.1
DDBJ      :             cyclopropane-fatty-acyl-phospholipid synthase (CMAS family)
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  34/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.66.1
:393 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   85->240 3egeA PDBj 7e-06 10.4 %
:RPS:SCOP  89->223 2p7hA1  c.66.1.41 * 3e-07 20.3 %
:HMM:SCOP  64->288 1kpiA_ c.66.1.18 * 4.7e-12 18.4 %
:HMM:PFM   9->79 PF08421 * Methyltransf_13 9.1e-11 22.9 70/78  
:HMM:PFM   287->339 PF11214 * Med2 9.3e-05 29.2 48/105  
:HMM:PFM   164->184 PF08241 * Methyltransf_11 0.00011 61.9 21/95  
:HMM:PFM   345->387 PF02254 * TrkA_N 0.00053 30.2 43/116  
:BLT:SWISS 74->195 RSGA_LACLA 5e-05 22.1 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ21351.1 GT:GENE AAZ21351.1 GT:PRODUCT cyclopropane-fatty-acyl-phospholipid synthase (CMAS family) GT:DATABASE GIB00256CH01 GT:ORG pubi0 GB:ACCESSION GIB00256CH01 GB:LOCATION 522650..523831 GB:FROM 522650 GB:TO 523831 GB:DIRECTION + GB:PRODUCT cyclopropane-fatty-acyl-phospholipid synthase (CMAS family) GB:PROTEIN_ID AAZ21351.1 GB:DB_XREF GI:71062348 LENGTH 393 SQ:AASEQ MKFKIKDKCNICKKFFFTHNSIDLPRLPITEIFLRSPNYKKKILFDQKINYCQSCHHMQLQNQYDTSHFYNKDYLTSSTNSYSGRYTNDIFYEFIKSNIDQNKKYNILEIGANDLYLIKKMKKFIRSGCTIDPCIKPDSSLKKIKYIKKFLENTSINEIDFIPDIVVCSHTLEHIEDPKKFIKMLTSFGDDKTKYFFQFPSCESLLDRRAFDQIHHQHFNFFSINSISKLLKKIKFDVKEYDIGELHYGSLMIYFKKSKDNIKNKNVQKFNGKLSDIYYDYKMYMKNLIQIIKKYQKRGSKVYGIGAGLMLPLVNYHLNNLLKDFDGILDDDKNKLNKFYPNLSTKISSLKNADLSNAVAVICSTASSVTTRKLVEICRLKNAKIIIIPSMTL GT:EXON 1|1-393:0| BL:SWS:NREP 1 BL:SWS:REP 74->195|RSGA_LACLA|5e-05|22.1|122/307| SEG 226->235|siskllkkik| RP:PDB:NREP 1 RP:PDB:REP 85->240|3egeA|7e-06|10.4|154/245| HM:PFM:NREP 4 HM:PFM:REP 9->79|PF08421|9.1e-11|22.9|70/78|Methyltransf_13| HM:PFM:REP 287->339|PF11214|9.3e-05|29.2|48/105|Med2| HM:PFM:REP 164->184|PF08241|0.00011|61.9|21/95|Methyltransf_11| HM:PFM:REP 345->387|PF02254|0.00053|30.2|43/116|TrkA_N| RP:SCP:NREP 1 RP:SCP:REP 89->223|2p7hA1|3e-07|20.3|128/229|c.66.1.41| HM:SCP:REP 64->288|1kpiA_|4.7e-12|18.4|217/0|c.66.1.18|1/1|S-adenosyl-L-methionine-dependent methyltransferases| OP:NHOMO 35 OP:NHOMOORG 34 OP:PATTERN -------------------------------------------------------------------- -----------------------------------------------------------------1---------------------------------------------------------------------------------1--21---11------------1-1----1----------------------1111-1-1-1-----------------------------------------------------------------------------------------------------------------------111---------------------------------------------------------111---1-------------1---1------------1--1-----------------------------------------------------------------1----------------------------------------------------------------------------------------------------------1----1------------------------1------1-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-------1-------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 345 STR:RPRED 87.8 SQ:SECSTR #####cccccccccccccTTGGGGcTHHHHHHcc##HHHHHHHHHHHHTTEEEEEEcccccHHccHHHHHHHHHcEEHHHTccHccccHHHHHHHHHHHcccTTcEEEEETcTTcHHHHHHHTTTcEEEEEcccHHHHcccccTTEEEEcccTTcccccTTcccEEEEEccGGGcccHHHHHHHcccccEEEEEEcGGGccccTTGGGGTcHHHHHHHHTcccHHHHHHHHHHHHccEEETGGGcEEETEEEEEEEccccccccTTTTTcccccccGGGcccccTTTGGGGTccccccccccccccccccccHHHHHHHHHTTcccccccccccTTTccccccccHHHHHHH######################################### DISOP:02AL 263-264| PSIPRED ccEEEcccccccccccccHHHHccccccccccccccHHccccccccEEEEEEccccEEEEcccccHHHHcccccEEccccHHHHHHHHHHHHHHHHHHHccccccEEEEEEccHHHHHHHHHHcccEEEEEcccHHHHHHHcccccHHHHHHHHHHHHccccEEEEEHHHHHHHHccHHHHHHHHHHHcccccEEEEEEccHHHHHHHcccccccHHHHEEccHHHHHHHHHHcccEEEEEEEEEEcccEEEEEEEEcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEEcccHHHHHHHHHcccHHHccEEEEccHHHccccccccccccccHHHcccccEEEEEcccccHHHHHHHHHHHHcccEEEEEcccccc //