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Candidatus Pelagibacter ubique HTCC1062 (pubi0)
Gene : AAZ21372.1
DDBJ      :             glycosyl transferase family
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  19/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
:357 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   275->353 3dzcA PDBj 5e-04 7.9 %
:HMM:PFM   276->336 PF00534 * Glycos_transf_1 0.00018 23.0 61/172  
:BLT:SWISS 210->353 YKVP_BACSU 5e-13 31.2 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ21372.1 GT:GENE AAZ21372.1 GT:PRODUCT glycosyl transferase family GT:DATABASE GIB00256CH01 GT:ORG pubi0 GB:ACCESSION GIB00256CH01 GB:LOCATION complement(544167..545240) GB:FROM 544167 GB:TO 545240 GB:DIRECTION - GB:PRODUCT glycosyl transferase family GB:PROTEIN_ID AAZ21372.1 GB:DB_XREF GI:71062369 LENGTH 357 SQ:AASEQ MKIYHTKNNIKILNLRNTTNNLNSNFKTLIISNNSKNAWSNAINSLKAIKFKKSKIIYPSNKKKLDFSIFTKILLKFKIFYDQFNINKKIIDELNYNNFQKIIIIQPFNIYGSTLKKIKKEHKGIEIIALFIDPLLHQNYFTFNLIFSLRYFDKIIYRQPFNEKYLNILNKNFKIRCFPGVTKIKKKLGKKKYLYDVTFIGTYEKERFELLEYLSQNDIKVTVFGNGWQNIKSNKNLIIKGKAIYGAKFYKTIFSSKINMGFLRKDNQDVYNSKTVEILAAGGFMLSEYSPYIKKIFKNNKELVFFNHNKLELLKTVKYFLNNSKLREKIKNNGFKKVNEGLFNYSSQLLKIINFKT GT:EXON 1|1-357:0| BL:SWS:NREP 1 BL:SWS:REP 210->353|YKVP_BACSU|5e-13|31.2|141/100| SEG 6->29|tknnikilnlrnttnnlnsnfktl| SEG 116->128|kkikkehkgieii| SEG 183->192|kikkklgkkk| RP:PDB:NREP 1 RP:PDB:REP 275->353|3dzcA|5e-04|7.9|76/373| HM:PFM:NREP 1 HM:PFM:REP 276->336|PF00534|0.00018|23.0|61/172|Glycos_transf_1| OP:NHOMO 19 OP:NHOMOORG 19 OP:PATTERN -------------------------------------------------------------------- 1-------------------------------------1----------------------------------------------------1-1----------------------------------------------------1-----------------------------------------------------11-111--1-----111---------------1-------------------------------------------------------------------------------------------1-------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---------------------------------------------------------------------------------1---------1---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 76 STR:RPRED 21.3 SQ:SECSTR ##################################################################################################################################################################################################################################################################################GTTGGGGTccEEEcccccccHHHHHHTcEEEcTTcHHHHHHHHHHHHHcHHHHHHHHTcccTTccc###cHHHHHHHHH#### DISOP:02AL 1-6| PSIPRED cEEEEEcccEEEEEEEcccccccccEEEEEEEccccccHHHHHHHHHHHHHEEEEEEEEccHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHccccEEEEEEccccccHHHHHHHHHHcccEEEEEEEEcccccccccccEEEEHHHHHHHHEEcHHHHHHHHHHccccEEEEEcccccccccccccccccccEEEEEcccccHHHHHHHHHHcccEEEEEccccccccccccEEEccccccHHHHHHHHHHHHHHcccccccccccccccEEEEHHccEEEEEccHHHHHHHcccccEEEEEcccHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHcc //