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Candidatus Pelagibacter ubique HTCC1062 (pubi0)
Gene : AAZ21375.1
DDBJ      :             carbamoyltransferase
Swiss-Prot:             

Homologs  Archaea  20/68 : Bacteria  130/915 : Eukaryota  6/199 : Viruses  1/175   --->[See Alignment]
c.55.1d.115.1
:577 amino acids
:PSIPRED
:DISOPRED
:RPS:SCOP  238->331 2i7nA2  c.55.1.14 * 2e-04 16.7 %
:RPS:SCOP  398->568 1hruA  d.115.1.1 * 1e-21 18.5 %
:HMM:SCOP  5->358 1huxA_ c.55.1.5 * 3.1e-13 23.2 %
:RPS:PFM   133->511 PF02543 * CmcH_NodU 4e-65 42.0 %
:HMM:PFM   133->511 PF02543 * CmcH_NodU 4.1e-94 39.8 352/360  
:BLT:SWISS 7->576 Y1178_SYNY3 8e-83 37.2 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ21375.1 GT:GENE AAZ21375.1 GT:PRODUCT carbamoyltransferase GT:DATABASE GIB00256CH01 GT:ORG pubi0 GB:ACCESSION GIB00256CH01 GB:LOCATION 547210..548943 GB:FROM 547210 GB:TO 548943 GB:DIRECTION + GB:PRODUCT carbamoyltransferase GB:PROTEIN_ID AAZ21375.1 GB:DB_XREF GI:71062372 LENGTH 577 SQ:AASEQ MLKNKIILGLNAFHADSSAAITIDNEIIAAAEEERFNRKKHWSGFPLESIKFCLEKSNINFKDITDVAINSNQFSNINQKIFYSLINLKFENLSKFIKRNKKKFLIQNIIDYNFGKKNNYKFHRIDHHLAHLASAFYPSGYSKALGLSIDGMGDFCSIAVADCNLDNKNKINIIKRIFYPNSLGILYESITQFLGFDKYGEEYKVMGLAPYGNPIYLNEISKLFLGDFELDLKFFNHDKKNYNYKFEGTPVQETLLNKKFYDILGSPRSSNESLEQFHMDVAASLQKVFEEKIFVLINQNLHIDNKRLVLAGGCAMNSSCNGKIVEKKIFENIFIPPAPGDAGGAIGSALVVLERNQKFLELKNFKNPYLGKSYSNDEIYRFIETKIDKKKFQIEKFNDDASLLKNTVKLLLSQKIIGWFQGSMEFGSRALGNRSIICDPRLKHARDLINTKIKFREKFRPFAPSILEEEVDKWFDSENKSSYMSFVYKIKKDKQKIIPAVTHVDGTGRLQTVSRNINKKFYDLIKEFNQNTSVPILLNTSFNENEPIVESPLNAINTFLKTKMDVLVLENYVISRK GT:EXON 1|1-577:0| BL:SWS:NREP 1 BL:SWS:REP 7->576|Y1178_SYNY3|8e-83|37.2|549/615| SEG 19->34|aaitidneiiaaaeee| SEG 167->175|nknkiniik| SEG 333->347|ifippapgdaggaig| RP:PFM:NREP 1 RP:PFM:REP 133->511|PF02543|4e-65|42.0|357/358|CmcH_NodU| HM:PFM:NREP 1 HM:PFM:REP 133->511|PF02543|4.1e-94|39.8|352/360|CmcH_NodU| GO:PFM:NREP 2 GO:PFM GO:0003824|"GO:catalytic activity"|PF02543|IPR003696| GO:PFM GO:0009058|"GO:biosynthetic process"|PF02543|IPR003696| RP:SCP:NREP 2 RP:SCP:REP 238->331|2i7nA2|2e-04|16.7|84/212|c.55.1.14| RP:SCP:REP 398->568|1hruA|1e-21|18.5|157/186|d.115.1.1| HM:SCP:REP 5->358|1huxA_|3.1e-13|23.2|250/0|c.55.1.5|1/1|Actin-like ATPase domain| OP:NHOMO 211 OP:NHOMOORG 157 OP:PATTERN -----------2---1-------------------12111111----------11111111----1-1 -12------------11------------------------1-2--------------------621-1-------------1--------------------1-2-21--------------------------------------1--11----------1-1-----12---1--21--2--1---------------------1-----------------------------------------------------------------------------------------------------------------------------------------------------------------------1---------1122-1--11112------------11111111-1------1-3---111---------------------------2-------------------------------1--1------1111-12311111112222211-2-11----113--------1----2-111-----------112--1-1-----11-----1-----------11--------------------------------------------------------------------------1---------------------------------------52-----------------1---------1------------------------2-4---------------------------1122222111111111111----------------------------------------3---2211-----------------------------------------------1- ------------------------------------------------------------------------------------------------------------2----------------------------------------------------------------11-----------------11----1 -----------------------2------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-2| PSIPRED cccccEEEEEEccccccEEEEEEccEEEEEEEHHHHHccHHcccccHHHHHHHHHHHcccHHHccEEEEEccccHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHcccccccccEEEEcHHHHHHHHHHcccccccccEEEEEcccccccccEEEEEEEccccEEEEEEEEcccHHHHHHHHHHHHHcccccccHHHHHHcccccccHHHHHHHHHHHcccHHHHHHccHHccccccccccccHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEccHHHHHHHHHHHHHcccccEEEEccccccHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHcccEEEEccccHHHHHHHHHHHHcccEEEEEEcccccccccccccEEEEccccHHHHHHHHHHHHccccccccccEEEHHHHHHHcccccccccEEEEEEccHHHHHcccEEEEEccccEEEEEcccccHHHHHHHHHHHHHccccEEEEccccccccEEccHHHHHHHHHcccccEEEEccEEEEEc //