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Candidatus Pelagibacter ubique HTCC1062 (pubi0)
Gene : AAZ21377.1
DDBJ      :             glycosyl transferase
Swiss-Prot:             

Homologs  Archaea  20/68 : Bacteria  95/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.87.1
:377 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   196->310 3c48B PDBj 7e-05 22.6 %
:RPS:PDB   185->351 2bfwA PDBj 2e-18 17.6 %
:RPS:SCOP  188->329 2bfwA1  c.87.1.8 * 2e-19 18.6 %
:HMM:SCOP  3->375 2iw1A1 c.87.1.8 * 1.3e-37 20.6 %
:RPS:PFM   207->350 PF00534 * Glycos_transf_1 1e-14 31.9 %
:HMM:PFM   196->356 PF00534 * Glycos_transf_1 9.7e-30 30.6 160/172  
:BLT:SWISS 190->326 Y1607_METJA 3e-14 31.3 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ21377.1 GT:GENE AAZ21377.1 GT:PRODUCT glycosyl transferase GT:DATABASE GIB00256CH01 GT:ORG pubi0 GB:ACCESSION GIB00256CH01 GB:LOCATION complement(549536..550669) GB:FROM 549536 GB:TO 550669 GB:DIRECTION - GB:PRODUCT glycosyl transferase GB:PROTEIN_ID AAZ21377.1 GB:DB_XREF GI:71062374 LENGTH 377 SQ:AASEQ MIKILYFLDHPIQYQNPFLDRISLSSKINLNVIYLSDFSLKPYFDEGLNKTIKFDDIENFSHKHQFIFKDKNKSKIKFLIRLTKILFKEKPKYFWVHGYSNFYSMSSIIIARLLSIKVLLRGESSNFFKNNLKSKISIFLFFKIIDPLITNYLAIGKKNKEFYLNNTKKNILKLPYIVGNLSKKKIIKKEDLMNLRKKIQIKQNSFIIFYNAKIIDRKNPELLIKSFLKIEKACKIPVTLIIAGDGNIKDRLINRYKNFRNIKFVGFINQNLLCQFYALSDLFVLPSKYDAWGLVVNEAMSFSKPVITSRNVISSYDLVKQNVNGVAFNNKFHLEQSIINIINNKDIRYRYSKNSKIIIKNWSIETANKYFHKIFVK GT:EXON 1|1-377:0| BL:SWS:NREP 1 BL:SWS:REP 190->326|Y1607_METJA|3e-14|31.3|134/390| SEG 132->145|lkskisiflffkii| SEG 352->364|sknskiiiknwsi| BL:PDB:NREP 1 BL:PDB:REP 196->310|3c48B|7e-05|22.6|115/396| RP:PDB:NREP 1 RP:PDB:REP 185->351|2bfwA|2e-18|17.6|165/196| RP:PFM:NREP 1 RP:PFM:REP 207->350|PF00534|1e-14|31.9|141/165|Glycos_transf_1| HM:PFM:NREP 1 HM:PFM:REP 196->356|PF00534|9.7e-30|30.6|160/172|Glycos_transf_1| GO:PFM:NREP 1 GO:PFM GO:0009058|"GO:biosynthetic process"|PF00534|IPR001296| RP:SCP:NREP 1 RP:SCP:REP 188->329|2bfwA1|2e-19|18.6|140/196|c.87.1.8| HM:SCP:REP 3->375|2iw1A1|1.3e-37|20.6|355/0|c.87.1.8|1/1|UDP-Glycosyltransferase/glycogen phosphorylase| OP:NHOMO 137 OP:NHOMOORG 115 OP:PATTERN ----------------21---1-----------2-11-1---1---11-13-1-121-2211------ 1----------------------------------------11-------------------------------------------12-1---2-------11---12-1-----------------------1--1--11-----221111-----------1----11-----11--1--1-----11---------------------11--------1-1-111111-1---------------------------------11--------1----------11-------------------------------------1-11121121111-11221---11------------3-----------2------------------------------------------------------------------------------------------------------------------1----1-------------------------------------------------------------------------------------------------1----1----11----------------------1-----1-1------------------------------------------1--1---1--------1------------1-------1-------------------------------------------------------------------------------------------------------1--------------------1------------------1--------11-----1-2-------------------------12--------111 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 350 STR:RPRED 92.8 SQ:SECSTR #HEEEEEcTTccTTcccHHHHHHHHHTTcEEEEEEEcccGGGccEEEEETTEEEEEEccccccccccGGGGGGGHHHHHHHHHHHHHHHTccccEEEEEHHHHHHHHHHHHHHHTccEEEEccccHHHHcccccHHHHHHHHHHHHHHccEEEEccHHHHHHHHHHHcccGGGEEEccccccTTcccHHHHHHHHHHHTTccccEEEEEEcccccccccHHHHHHHHHHHTTcGGGGEEEEEEccccHHHHHHHHHHHHHEEEEcccccHHHHHHHHTTccEEEEccccccccHHHHHHHHTTcEEEEEcccTHHHHHHccTTTcEcTTcHHHHHHHHHHHHccHHHHHHH########################## PSIPRED cEEEEEEEccccccccHHHHHHHHHccccEEEEEEEcccccccccHHHHcccccccccccccEEEEEccccccHHHHHHHHHHHHHHHHcccEEEEEcccHHHHHHHHHHHHHccccEEEEEcccccccHHHHHHHHHHHHHHHHHHHccEEEEccHHHHHHHHHccccccEEEEEcccccccccccccHHHHHHHHHcccccccEEEEEEEEccccccHHHHHHHHHHHHHHccccEEEEEEccHHHHHHHHHHHcccccEEEEEcccHHHHHHHHHHccEEEEccccccccHHHHHHHHccccEEEEcccccHHHHHccccccEEcccHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHcc //