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Candidatus Pelagibacter ubique HTCC1062 (pubi0)
Gene : AAZ21379.1
DDBJ      :             Cyclopropane-fatty-acyl-phospholipid
Swiss-Prot:             

Homologs  Archaea  1/68 : Bacteria  1/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.66.1e.50.1
:233 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   42->170 3dliA PDBj 2e-11 27.9 %
:RPS:PDB   24->112 3egeA PDBj 2e-06 13.5 %
:RPS:SCOP  42->112 2p7hA1  c.66.1.41 * 4e-07 23.9 %
:RPS:SCOP  161->225 1xfiA  e.50.1.1 * 3e-04 9.2 %
:HMM:SCOP  1->204 1xtpA_ c.66.1.42 * 6.4e-19 18.0 %
:HMM:PFM   46->133 PF08242 * Methyltransf_12 5.7e-10 24.4 86/99  
:BLT:SWISS 3->105 Y1435_CLOAB 7e-04 27.2 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ21379.1 GT:GENE AAZ21379.1 GT:PRODUCT Cyclopropane-fatty-acyl-phospholipid GT:DATABASE GIB00256CH01 GT:ORG pubi0 GB:ACCESSION GIB00256CH01 GB:LOCATION 551827..552528 GB:FROM 551827 GB:TO 552528 GB:DIRECTION + GB:PRODUCT Cyclopropane-fatty-acyl-phospholipid GB:PROTEIN_ID AAZ21379.1 GB:DB_XREF GI:71062376 LENGTH 233 SQ:AASEQ MNLTNKIYSSYSKLALNSDTDSEQNFNYFDQELKKIDNLYEKKIIEIGYGKGFFLDWAKSSKLDIIGYEINEDFHKNAEQNHKVILGDGSNISKEVSDKFDLIILFDVIEHISKENLLNFFQNLNELLNKEGEILLRFPNGSSAAGLEYFNSDLTHFSFLNKRSLKMIAEINKLELVYYGNMQRVKKFKSLRGKLFGRMIYFFRDLIEYVYGNLYFGQKIPLDPNVVGVLKKN GT:EXON 1|1-233:0| BL:SWS:NREP 1 BL:SWS:REP 3->105|Y1435_CLOAB|7e-04|27.2|103/100| SEG 115->129|enllnffqnlnelln| BL:PDB:NREP 1 BL:PDB:REP 42->170|3dliA|2e-11|27.9|129/221| RP:PDB:NREP 1 RP:PDB:REP 24->112|3egeA|2e-06|13.5|89/245| HM:PFM:NREP 1 HM:PFM:REP 46->133|PF08242|5.7e-10|24.4|86/99|Methyltransf_12| RP:SCP:NREP 2 RP:SCP:REP 42->112|2p7hA1|4e-07|23.9|71/229|c.66.1.41| RP:SCP:REP 161->225|1xfiA|3e-04|9.2|65/343|e.50.1.1| HM:SCP:REP 1->204|1xtpA_|6.4e-19|18.0|194/0|c.66.1.42|1/1|S-adenosyl-L-methionine-dependent methyltransferases| OP:NHOMO 2 OP:NHOMOORG 2 OP:PATTERN -----------------------1-------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 188 STR:RPRED 80.7 SQ:SECSTR ####ccHHHHHHHHHHHHTccHHcccHHHHHHHHHHcccTTcEEEEETcTTcHHHHHHHTTTcEEEEEcccHHHHcccccTTEEEEcccTTcccccTTcccEEEEEccGGGcccTcTHHHHHHGGGGEEEEEEEEccEEEEEEEEEccHHTTcTTccccccHHHHHHHHHEEEEEEEEccc#####GGHHHHHHHHH#################################### DISOP:02AL 232-234| PSIPRED ccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHccccccEEEEEccccHHHHHHHHHcccEEEEEEccHHHHHHHHHHccEEEccHHHcccccccccHHHHHHHHHHHccccHHHHHHHHHHHHcccccEEEEEEcccccccccccccccccEEEEccHHHHHHHHHHcccEEEEEcccEEHHHcccccccHHHHHHHHHHHHHHHHHccccccEEccccccEEEEEccc //