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Candidatus Pelagibacter ubique HTCC1062 (pubi0)
Gene : AAZ21382.1
DDBJ      :             oxidoreductase family
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  1/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.2.1
:246 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   4->160 1dapA PDBj 7e-09 9.6 %
:RPS:SCOP  4->129 1dapA1  c.2.1.3 * 2e-08 9.5 %
:HMM:SCOP  5->137 1ydwA1 c.2.1.3 * 6.4e-21 28.6 %
:HMM:PFM   42->106 PF01408 * GFO_IDH_MocA 4.6e-15 30.8 65/120  
:HMM:PFM   6->54 PF00044 * Gp_dh_N 1.1e-07 22.4 49/151  
:HMM:PFM   177->234 PF02800 * Gp_dh_C 0.00031 22.8 57/157  
:HMM:PFM   87->147 PF07934 * OGG_N 0.0009 21.1 38/117  
:BLT:SWISS 113->241 YCF2_PHYPA 7e-04 29.7 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ21382.1 GT:GENE AAZ21382.1 GT:PRODUCT oxidoreductase family GT:DATABASE GIB00256CH01 GT:ORG pubi0 GB:ACCESSION GIB00256CH01 GB:LOCATION 554312..555052 GB:FROM 554312 GB:TO 555052 GB:DIRECTION + GB:PRODUCT oxidoreductase family GB:PROTEIN_ID AAZ21382.1 GB:DB_XREF GI:71062379 LENGTH 246 SQ:AASEQ MIKKKINLGIIGFGSWGKRVFNVIKKNQNIKILFIETKKNDFSNMYHKVDWVYIVTPPNNHFEQVKKFLLLKLNVLCEKPLSFKKQELVYLYDLAKKNKKKLFINHIEFFKINEKKFLYKKNNIIENYFPLNLDYSESFSRLLYHDFYLLYNCIKNQSFNLRLIDQKDNYELEFKHKSLVQKIKTSLYKKKKRIHKINNENLVTNKDYINEYFYSIFTSHQSYLINKKQVFFVSKIYDKFMNIKKK GT:EXON 1|1-246:0| BL:SWS:NREP 1 BL:SWS:REP 113->241|YCF2_PHYPA|7e-04|29.7|128/2259| SEG 66->81|kkflllklnvlcekpl| RP:PDB:NREP 1 RP:PDB:REP 4->160|1dapA|7e-09|9.6|157/320| HM:PFM:NREP 4 HM:PFM:REP 42->106|PF01408|4.6e-15|30.8|65/120|GFO_IDH_MocA| HM:PFM:REP 6->54|PF00044|1.1e-07|22.4|49/151|Gp_dh_N| HM:PFM:REP 177->234|PF02800|0.00031|22.8|57/157|Gp_dh_C| HM:PFM:REP 87->147|PF07934|0.0009|21.1|38/117|OGG_N| RP:SCP:NREP 1 RP:SCP:REP 4->129|1dapA1|2e-08|9.5|126/170|c.2.1.3| HM:SCP:REP 5->137|1ydwA1|6.4e-21|28.6|133/0|c.2.1.3|1/1|NAD(P)-binding Rossmann-fold domains| OP:NHOMO 1 OP:NHOMOORG 1 OP:PATTERN -------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 160 STR:RPRED 65.0 SQ:SECSTR cccccEEEEEEcccHHHHHHHHHHTTcccEEEEEEEEccccccccccTccEEEEcccTTTHHHHHHHHHTTTcEEEcccccGGGHHHHHHHHHHHHHHHTcEEEEccccTcHHHHHHHHHHHHccccEEEEEEccEEcHHHHHHHHTcTTccEEEEEEEE###################################################################################### DISOP:02AL 245-246| PSIPRED ccccEEEEEEEEccHHHHHHHHHHHHccccEEEEEEcccHHHHHHHHcccEEEEEcccHHHHHHHHHHHHccccEEEEccccccHHHHHHHHHHHHHcccEEEEEEEEcccHHHHHHHHHHHHHHcccccccEEHHHHHHHHHHHHHHHHHHHHccccEEEEEEcccccEEEEEEccEEEEEEEEEEEEEEEccEEEEcccEEEEEEEEcEEEEEEEEEcccHHHcccEEEEEEEEEHHHHccccc //