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Candidatus Pelagibacter ubique HTCC1062 (pubi0)
Gene : AAZ21411.1
DDBJ      :             5-formyltetrahydrofolate cyclo-ligase
Swiss-Prot:             

Homologs  Archaea  2/68 : Bacteria  180/915 : Eukaryota  2/199 : Viruses  0/175   --->[See Alignment]
c.124.1
:182 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   25->180 1souA PDBj 4e-12 31.2 %
:RPS:SCOP  41->176 1sbqA  c.124.1.6 * 6e-22 29.4 %
:HMM:SCOP  1->183 1souA_ c.124.1.6 * 1.3e-42 35.6 %
:RPS:PFM   44->176 PF01812 * 5-FTHF_cyc-lig 2e-17 37.1 %
:HMM:PFM   3->177 PF01812 * 5-FTHF_cyc-lig 1.2e-36 29.1 175/186  
:BLT:SWISS 22->68 YCF1_EUCGG 5e-04 48.9 %
:BLT:SWISS 53->178 Y370_BUCBP 1e-12 34.1 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ21411.1 GT:GENE AAZ21411.1 GT:PRODUCT 5-formyltetrahydrofolate cyclo-ligase GT:DATABASE GIB00256CH01 GT:ORG pubi0 GB:ACCESSION GIB00256CH01 GB:LOCATION 577506..578054 GB:FROM 577506 GB:TO 578054 GB:DIRECTION + GB:PRODUCT 5-formyltetrahydrofolate cyclo-ligase GB:PROTEIN_ID AAZ21411.1 GB:DB_XREF GI:71062408 LENGTH 182 SQ:AASEQ MLKSELRKKILKIRKKFNTKNIQLNFKQIVKILKKEKITNQIMIGGYYPVNFEIDDLTLLRKFKKNKFNISLPIIKKNFQMDFYSWSFSEPLKINKYGIPEPEAKNIVYPDVLLIPLVAFDKNLNRLGYGGGYYDRLIEKLSKKKNIIKIGLAFSIQEIDKVPTNMYDKKLDYIVTNKNIIK GT:EXON 1|1-182:0| BL:SWS:NREP 2 BL:SWS:REP 22->68|YCF1_EUCGG|5e-04|48.9|45/1877| BL:SWS:REP 53->178|Y370_BUCBP|1e-12|34.1|126/195| SEG 6->16|lrkkilkirkk| SEG 128->134|gygggyy| BL:PDB:NREP 1 BL:PDB:REP 25->180|1souA|4e-12|31.2|144/194| RP:PFM:NREP 1 RP:PFM:REP 44->176|PF01812|2e-17|37.1|132/181|5-FTHF_cyc-lig| HM:PFM:NREP 1 HM:PFM:REP 3->177|PF01812|1.2e-36|29.1|175/186|5-FTHF_cyc-lig| GO:PFM:NREP 3 GO:PFM GO:0005524|"GO:ATP binding"|PF01812|IPR002698| GO:PFM GO:0009396|"GO:folic acid and derivative biosynthetic process"|PF01812|IPR002698| GO:PFM GO:0030272|"GO:5-formyltetrahydrofolate cyclo-ligase activity"|PF01812|IPR002698| RP:SCP:NREP 1 RP:SCP:REP 41->176|1sbqA|6e-22|29.4|119/164|c.124.1.6| HM:SCP:REP 1->183|1souA_|1.3e-42|35.6|177/194|c.124.1.6|1/1|NagB/RpiA/CoA transferase-like| OP:NHOMO 188 OP:NHOMOORG 184 OP:PATTERN ---------------------------------------------11--------------------- -----------------------------------------------------------------------------------1--11--1--1-------------------------------1-1-------------------------------------------------------------------------------------------------------1-------------------------------------------------------------------------------------------111-1-------1-111--1---------1-----------1----1--1----111111121111-1111111111111111111-11211311111-1111111111111-1-111-----111111111111---1--1111-1111--11--11-1-1-11111-1-1----1-----11111111111111-11111-1-1----1-1----1111----1----------------111--1----------1--------------------------------------------------1----1-1--------------------------1-1------------------------------------------------------------------------------------------1111111111---11---11--1111111----------------------------------------1------------------------------1--------------1--------1----------1-----------------1-- ---------------------------------------------------------------------------------------1--------------------------------------------------------------------------------------1------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 148 STR:RPRED 81.3 SQ:SECSTR ########################HHHHcHHHHHccEEEE######ccccccccccGGGHHHHHHHc#EEEEEEEccc#cEEEEEEccccccEEcccccEEccccEEEcGcEEEEccccccccccccccccccHHHHHHHcccccccEEEEEccGGGcccccccccccccccEEEccccE## PSIPRED ccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHccccccccEEEEEEEccccccHHHHHHHHHHcccEEEEEEEEcccEEEEEEEccccccEEcccccccccccccccccEEEEccEEEccccccccccccHHHHHHHHHHcccccEEEEEEEcEEEccccccccccccccEEEccccEEc //