[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Candidatus Pelagibacter ubique HTCC1062 (pubi0)
Gene : AAZ21540.1
DDBJ      :             probable ATPase involved in DNA replication initiation
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  91/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.37.1
:220 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   20->185 2z4rA PDBj 7e-05 24.1 %
:RPS:PDB   20->187 3bq9A PDBj 5e-04 11.0 %
:HMM:SCOP  11->201 1l8qA2 c.37.1.20 * 1.5e-11 13.2 %
:RPS:PFM   20->184 PF00308 * Bac_DnaA 9e-11 31.5 %
:HMM:PFM   14->61 PF00308 * Bac_DnaA 0.001 31.2 48/219  
:HMM:PFM   102->191 PF00308 * Bac_DnaA 4.6e-10 24.4 90/219  
:BLT:SWISS 12->187 DNAA_MYCVP 3e-10 30.3 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ21540.1 GT:GENE AAZ21540.1 GT:PRODUCT probable ATPase involved in DNA replication initiation GT:DATABASE GIB00256CH01 GT:ORG pubi0 GB:ACCESSION GIB00256CH01 GB:LOCATION 704468..705130 GB:FROM 704468 GB:TO 705130 GB:DIRECTION + GB:PRODUCT probable ATPase involved in DNA replication initiation GB:PROTEIN_ID AAZ21540.1 GB:DB_XREF GI:71062537 LENGTH 220 SQ:AASEQ MKNLNQLLLDFNYEQNFKDDDFYVGKSNFYAFEMINKWPKWEKNFLNINGEKFSGKSHLVNIFLKKFNGIRIDVNSLNDENIKSIKPYQNIVLEDLNLNINEKLIYSLFNIIDQDNKFLIVTSMKPISEINFKLEDLRSRTKNCLFANIQNPDDELMFALILKNLSDRQITLDKKLINFIIKRIERSYGKIFEFIYKIDKISLKKKKSIDFKIINEALEE GT:EXON 1|1-220:0| BL:SWS:NREP 1 BL:SWS:REP 12->187|DNAA_MYCVP|3e-10|30.3|175/494| SEG 195->214|iykidkislkkkksidfkii| BL:PDB:NREP 1 BL:PDB:REP 20->185|2z4rA|7e-05|24.1|166/240| RP:PDB:NREP 1 RP:PDB:REP 20->187|3bq9A|5e-04|11.0|164/446| RP:PFM:NREP 1 RP:PFM:REP 20->184|PF00308|9e-11|31.5|165/218|Bac_DnaA| HM:PFM:NREP 2 HM:PFM:REP 14->61|PF00308|0.001|31.2|48/219|Bac_DnaA| HM:PFM:REP 102->191|PF00308|4.6e-10|24.4|90/219|Bac_DnaA| HM:SCP:REP 11->201|1l8qA2|1.5e-11|13.2|189/213|c.37.1.20|1/1|P-loop containing nucleoside triphosphate hydrolases| OP:NHOMO 91 OP:NHOMOORG 91 OP:PATTERN -------------------------------------------------------------------- -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------111111-111111111111-1111111111-11111111111111111111111111--1-11------1--------------1111111111-111111111111111111111--1-1------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 168 STR:RPRED 76.4 SQ:SECSTR ###################ccccHHHHHHHHHHHHHHTGGGTTccccEEEEEcGGGHHHHHHHHHTcTTGGGGcEEEEccHHHHHHHHHHHHHHHHHHHHHTTcccccccccHHHHHTccccTTccHHHHHcccHHHHHHHHHHHHHHHcHHHHHHHHHHHccEEEEccHHHHHHHHHHHHHHHHTT################################# DISOP:02AL 1-3| PSIPRED ccccccccccccccccccccccccccHHHHHHHHHHHHHcccccEEEEEccccccHHHHHHHHHHHcccEEEEHHHHHHHHHHHHHHcccEEEEccHHcccHHHHHHHHHHHHHcccEEEEEEccccHHHcccHHHHHHHHccEEEEEcccccHHHHHHHHHHHHHHccccccHHHHHHHHHHccccHHHHHHHHHHHHHHHHHccccccHHHHHHHHHc //