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Candidatus Pelagibacter ubique HTCC1062 (pubi0)
Gene : AAZ21545.1
DDBJ      :             biotin carboxylase
Swiss-Prot:             

Homologs  Archaea  46/68 : Bacteria  846/915 : Eukaryota  194/199 : Viruses  0/175   --->[See Alignment]
b.84.2c.30.1d.142.1
:445 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   1->442 2vqdA PDBj e-132 52.2 %
:RPS:PDB   2->442 1dv1A PDBj e-107 51.6 %
:RPS:SCOP  1->114 1bncA2  c.30.1.1 * 4e-21 62.3 %
:RPS:SCOP  114->350 1w93A3  d.142.1.2 * 2e-67 41.4 %
:RPS:SCOP  329->442 1bncA1  b.84.2.1 * 5e-41 46.9 %
:HMM:SCOP  1->113 1w96A2 c.30.1.1 * 3.6e-48 58.4 %
:HMM:SCOP  83->357 1w96A3 d.142.1.2 * 2.5e-70 35.9 %
:HMM:SCOP  329->443 1w96A1 b.84.2.1 * 2.9e-43 45.2 %
:RPS:PFM   3->110 PF00289 * CPSase_L_chain 8e-12 42.0 %
:RPS:PFM   115->308 PF02786 * CPSase_L_D2 1e-45 49.2 %
:RPS:PFM   334->440 PF02785 * Biotin_carb_C 2e-27 47.7 %
:HMM:PFM   115->315 PF02786 * CPSase_L_D2 7.4e-74 41.8 201/211  
:HMM:PFM   1->109 PF00289 * CPSase_L_chain 1.2e-43 52.3 109/110  
:HMM:PFM   334->440 PF02785 * Biotin_carb_C 4.1e-39 41.1 107/107  
:BLT:SWISS 1->442 ACCC_HAEIN e-134 52.4 %
:PROS 153->167|PS00866|CPSASE_1
:PROS 284->291|PS00867|CPSASE_2
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ21545.1 GT:GENE AAZ21545.1 GT:PRODUCT biotin carboxylase GT:DATABASE GIB00256CH01 GT:ORG pubi0 GB:ACCESSION GIB00256CH01 GB:LOCATION complement(708578..709915) GB:FROM 708578 GB:TO 709915 GB:DIRECTION - GB:PRODUCT biotin carboxylase GB:PROTEIN_ID AAZ21545.1 GB:DB_XREF GI:71062542 LENGTH 445 SQ:AASEQ MFKKILIANRGEIAVRVIRACKEWGIATVAVHSDVDKDSMHVRLADESVCIGSHQPANSYLNIPALMSAIELTKAEAVHPGYGFLSENANFAKVLEENNIKFIGASSKLIEMMGDKIQAKKIAKEHGLPVIEGSEGGITDVKTAKELCKKIGFPVLIKASAGGGGKGMKIVRKEEEFETLFSTAKSEAQKYFGNDEIYIEKFFQNPRHIEVQVLSGKNRTVHLHERDCSVQRRHQKLIEETPSPVLTDQIRKDLFERTVNMVSKIGYEGAGTVEFIYEDGKFYFLEMNTRVQVEHPVTEMVTGIDIIKEQIWIAYTGETALKQSDINPRGHAIECRINAEDASKNFQPSPGTIGMCHQPSGFRTRVDGAIFQGYKVTPFYDSMICKVITHGRNRTEAIQRMNRSLDEFVIEGITTTIPLHKILLNHKKFIESDFNVSWLDNEKVF GT:EXON 1|1-445:0| BL:SWS:NREP 1 BL:SWS:REP 1->442|ACCC_HAEIN|e-134|52.4|441/448| PROS 153->167|PS00866|CPSASE_1|PDOC00676| PROS 284->291|PS00867|CPSASE_2|PDOC00676| SEG 162->167|ggggkg| BL:PDB:NREP 1 BL:PDB:REP 1->442|2vqdA|e-132|52.2|441/447| RP:PDB:NREP 1 RP:PDB:REP 2->442|1dv1A|e-107|51.6|428/433| RP:PFM:NREP 3 RP:PFM:REP 3->110|PF00289|8e-12|42.0|100/102|CPSase_L_chain| RP:PFM:REP 115->308|PF02786|1e-45|49.2|191/207|CPSase_L_D2| RP:PFM:REP 334->440|PF02785|2e-27|47.7|107/107|Biotin_carb_C| HM:PFM:NREP 3 HM:PFM:REP 115->315|PF02786|7.4e-74|41.8|201/211|CPSase_L_D2| HM:PFM:REP 1->109|PF00289|1.2e-43|52.3|109/110|CPSase_L_chain| HM:PFM:REP 334->440|PF02785|4.1e-39|41.1|107/107|Biotin_carb_C| GO:PFM:NREP 6 GO:PFM GO:0003824|"GO:catalytic activity"|PF00289|IPR005481| GO:PFM GO:0008152|"GO:metabolic process"|PF00289|IPR005481| GO:PFM GO:0003824|"GO:catalytic activity"|PF02786|IPR005479| GO:PFM GO:0005524|"GO:ATP binding"|PF02786|IPR005479| GO:PFM GO:0008152|"GO:metabolic process"|PF02786|IPR005479| GO:PFM GO:0016874|"GO:ligase activity"|PF02785|IPR005482| RP:SCP:NREP 3 RP:SCP:REP 1->114|1bncA2|4e-21|62.3|114/114|c.30.1.1| RP:SCP:REP 114->350|1w93A3|2e-67|41.4|232/267|d.142.1.2| RP:SCP:REP 329->442|1bncA1|5e-41|46.9|113/116|b.84.2.1| HM:SCP:REP 1->113|1w96A2|3.6e-48|58.4|113/0|c.30.1.1|1/1|PreATP-grasp domain| HM:SCP:REP 83->357|1w96A3|2.5e-70|35.9|259/0|d.142.1.2|1/1|Glutathione synthetase ATP-binding domain-like| HM:SCP:REP 329->443|1w96A1|2.9e-43|45.2|115/0|b.84.2.1|1/1|Rudiment single hybrid motif| OP:NHOMO 3464 OP:NHOMOORG 1086 OP:PATTERN --1-1221222222211------221111-12221222221211111121121--1----------11 2442A32322242255544-451156444444566656BB16543221333263544322444156845341222111-2225444432223-2--1--12113221222111111111111111111221111423445411132111211211111111112112111111112111111112211111234444444444444444444444444545542222222263433333333333333333332-112213-1-3311222231212221111-11111111111111112111122312211111111111222134222333232344443222121-122-332222222121-112-12322755511111356453316575644444444445-33333432455186686567684444434445444445632333333422225462212211111--111111111111111121353314764533344333333333344441344569862244333434745569113332442112211222253424-124432333331343454523344355223323333333313111111114211222232332333142222222222242332441-11134------13342231111111111-111111111111111111113134323212222222222222121111111111111111111111112222224444144221111111111111115555532324346666365673333365522222222222222222222322222322222221111223-332233--------1-1---------------------------2---1--1121 1111436-732-5564565766576775555554446545555666553656865554444464444324536446626643444433-79555444554545AA8-7648565BC94555754AB5D5RvB-D8E45555558645546A5395743B6DP5C444H548C7D55343a3336561386466764457 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 445 STR:RPRED 100.0 SQ:SECSTR cccEEEEcccHHHHHHHHHHHHHHTcEEEEEEEGGGTTcHHHHHccEEEEEEcccGGGTTTcHHHHHHHHHHHTccEEEccccTTTTcHHHHHHHHHTTcEEccccHHHHHHHHcHHHHHHHHHHTTcccccccccccccHHHHHHHHHHHcccEEEEEccccccccccccccHHHHHHHHHHHHHHHHHHTccccEEEEEcccccEEEEEEEEEccccEEEEEEEEEEEEETTEEEEEEEccTTccHHHHHHHHHHHHHHHHHHTcEEEEEEEEEEETTEEEEEEEEccccTTHHHHHHHHcccHHHHHHHHHTTccccccGGGcccccEEEEEEEEcccTGTTcccccEEcccEEccccTTEEEEccccTTcEEccccccEEEEEEEEEccHHHHHHHHHHHHHHcEEccccccHHHHHHHHHcHHHHHccccTTHHHHHGHH PSIPRED cccEEEEEcccHHHHHHHHHHHHcccEEEEEccccccccccHHHccEEEEcccccccHHHccHHHHHHHHHHHcccEEEEccccccccHHHHHHHHHcccEEEcccHHHHHHHccHHHHHHHHHHcccccccccccccccHHHHHHHHHHccccEEEEEccccccccEEEEccHHHHHHHHHHHHHHHHHcccccEEEEEEcccccEEEEEEEEcccccEEEEEccccccccccccEEEEEccccccHHHHHHHHHHHHHHHHHHccccccEEEEEEEccEEEEEEEEccccccHHHHHHHHcccHHHHHHHHHccccccccccccccccEEEEEEEccccccccccccccEEEEEEcccccEEEEEEcccccccccccccccEEEEEEEcccHHHHHHHHHHHHHHEEEEcccccHHHHHHHHccHHHHccccccccccccccc //