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Candidatus Pelagibacter ubique HTCC1062 (pubi0)
Gene : AAZ21571.1
DDBJ      :             possible transmembrane protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  8/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
:248 amino acids
:PSIPRED
:HMM:PFM   6->242 PF01925 * TauE 1e-30 26.4 235/239  
:BLT:SWISS 1->84 ATP6_BARBK 1e-04 31.0 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ21571.1 GT:GENE AAZ21571.1 GT:PRODUCT possible transmembrane protein GT:DATABASE GIB00256CH01 GT:ORG pubi0 GB:ACCESSION GIB00256CH01 GB:LOCATION complement(733559..734305) GB:FROM 733559 GB:TO 734305 GB:DIRECTION - GB:PRODUCT possible transmembrane protein GB:PROTEIN_ID AAZ21571.1 GB:DB_XREF GI:71062568 LENGTH 248 SQ:AASEQ MIILSFLFLLTATLYSSVGFGGGSTYLALLLIWDIPYLIFPVIALFCNIIVVSGNCINYIKAGNINFKILTPYLISSVPLAFIGGSLSVDKEIFEILLFLVLALAGVLLLMKFQSFDQKIEVYKKIPKILSILIGASIGFVSGVVGIGGGIFLSPILLLIRVDKAKNIATAASLFILINSLSGLAGQFTKASTINGIYDYWPLFFFVLIGGQLGNYLNLKIFPARILALVTSGLVIFVAIRMGLKLFA GT:EXON 1|1-248:0| BL:SWS:NREP 1 BL:SWS:REP 1->84|ATP6_BARBK|1e-04|31.0|84/252| TM:NTM 8 TM:REGION 1->21| TM:REGION 29->51| TM:REGION 68->90| TM:REGION 94->116| TM:REGION 134->156| TM:REGION 166->188| TM:REGION 195->217| TM:REGION 222->244| SEG 92->110|eifeillflvlalagvlll| SEG 134->152|igasigfvsgvvgigggif| HM:PFM:NREP 1 HM:PFM:REP 6->242|PF01925|1e-30|26.4|235/239|TauE| OP:NHOMO 9 OP:NHOMOORG 8 OP:PATTERN -------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------1-1----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-------------------------------------------------------------21-------------------------------------------------------11--------------------------------------------------------------------------------------------1-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PSIPRED cHHHHHHHHHHHHHHHHHccccHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHcccccHHEHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHccccccccHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHcccEEHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHc //