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Candidatus Pelagibacter ubique HTCC1062 (pubi0)
Gene : AAZ21638.1
DDBJ      :             sulfide dehydrogenase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  94/915 : Eukaryota  4/199 : Viruses  0/175   --->[See Alignment]
c.46.1
:127 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   12->118 2hhgA PDBj 8e-20 46.2 %
:RPS:PDB   11->121 1e0cA PDBj 5e-19 14.5 %
:RPS:SCOP  11->124 1tq1A  c.46.1.3 * 8e-21 23.2 %
:HMM:SCOP  8->129 1rhsA2 c.46.1.2 * 6.1e-26 34.4 %
:RPS:PFM   77->118 PF00581 * Rhodanese 5e-07 52.4 %
:HMM:PFM   21->120 PF00581 * Rhodanese 8.3e-18 34.3 99/113  
:BLT:SWISS 53->115 Y1885_SHEPW 3e-08 41.3 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ21638.1 GT:GENE AAZ21638.1 GT:PRODUCT sulfide dehydrogenase GT:DATABASE GIB00256CH01 GT:ORG pubi0 GB:ACCESSION GIB00256CH01 GB:LOCATION 794910..795293 GB:FROM 794910 GB:TO 795293 GB:DIRECTION + GB:PRODUCT sulfide dehydrogenase GB:PROTEIN_ID AAZ21638.1 GB:DB_XREF GI:71062635 LENGTH 127 SQ:AASEQ MNIKSSHTLVAEALREIKTISPEQALKLSNENKCSLIDIREKGELDKSGRVENSHHIPRGMLEFWLDPESPYFKNGKLDMEKEIVLFCAGGLRSALAAKSLKEMGFENVSHIEGGFAAISQSDFKIV GT:EXON 1|1-127:0| BL:SWS:NREP 1 BL:SWS:REP 53->115|Y1885_SHEPW|3e-08|41.3|63/327| BL:PDB:NREP 1 BL:PDB:REP 12->118|2hhgA|8e-20|46.2|104/128| RP:PDB:NREP 1 RP:PDB:REP 11->121|1e0cA|5e-19|14.5|110/270| RP:PFM:NREP 1 RP:PFM:REP 77->118|PF00581|5e-07|52.4|42/108|Rhodanese| HM:PFM:NREP 1 HM:PFM:REP 21->120|PF00581|8.3e-18|34.3|99/113|Rhodanese| RP:SCP:NREP 1 RP:SCP:REP 11->124|1tq1A|8e-21|23.2|112/119|c.46.1.3| HM:SCP:REP 8->129|1rhsA2|6.1e-26|34.4|122/0|c.46.1.2|1/1|Rhodanese/Cell cycle control phosphatase| OP:NHOMO 120 OP:NHOMOORG 98 OP:PATTERN -------------------------------------------------------------------- -111--------------------------------------------------------------1--1------------1------------------------------------------1-------------------1-------11-1--------------------------1-------1------------1---1--------------1--------------------------------------------------------------------------------------------------------------------------------------------1--------1-------------2222-122222-------------11-3-2-31-------------1-2----211112112-------------1-------------------------------2--------------------------------------11--1------211-----1--1-------------------------------------------11-----------------------1------1111--1--1-----1-1------11-11---1--2---------------------------------------------------------------------------------------------1111111111-----------------------------1--------------1---111111111------------------------------1--------------------------------------------------------- -------------1----------------------------------------------------------------------------2----------------1----------------------------------------------------------1-------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 122 STR:RPRED 96.1 SQ:SECSTR #####cccccGGGTTcccEEcHHHHHTTTTcTTEEEEEcccHHHHHHccccTTcEEccGGGGcccccccHHHHHHTccTTcEEEEEcccccHHHHHHHHHHHHTTcccEEEETTHHHHHHHTTGGGc DISOP:02AL 1-3| PSIPRED cccHHHHHHHHHHHHHcccccHHHHHHHHHcccEEEEEcccHHHHHHHccccccEEccHHHHHHHccHHHHHHHHHccccccEEEEEEcccHHHHHHHHHHHHcccccEEEccccHHHHHHcccccc //