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Candidatus Pelagibacter ubique HTCC1062 (pubi0)
Gene : AAZ21650.1
DDBJ      :             Aminotransferase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  1/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
e.17.1
:224 amino acids
:SECSTR
:PSIPRED
:RPS:PDB   91->195 1a0gB PDBj 6e-11 17.1 %
:RPS:SCOP  86->195 1et0A  e.17.1.1 * 2e-11 15.5 %
:HMM:SCOP  9->218 1daaA_ e.17.1.1 * 1.7e-21 18.7 %
:HMM:PFM   11->212 PF01063 * Aminotran_4 2.6e-23 21.6 199/232  
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ21650.1 GT:GENE AAZ21650.1 GT:PRODUCT Aminotransferase GT:DATABASE GIB00256CH01 GT:ORG pubi0 GB:ACCESSION GIB00256CH01 GB:LOCATION 803522..804196 GB:FROM 803522 GB:TO 804196 GB:DIRECTION + GB:PRODUCT Aminotransferase GB:NOTE class IV GB:PROTEIN_ID AAZ21650.1 GB:DB_XREF GI:71062647 LENGTH 224 SQ:AASEQ MWIFGKPAKILFFKKHIKNLIKSLKVYKLNNPNLEKNILKLIKLNIDKKRSYNHLLRVAVNKKMISISLRNRKTPKLNFNLKLIRHKRFDPKFKNLKYNFILKHLSKMDNTTSDVGLCYKNTILESGTSNMLFIKDDKVYSPINNIYKGITYKFFNKKLGKIINKDILIKTLSEFSEILLIGSGKGVASIKNINEIKWKRKSFKFYKKLSNFYKNEVNKCSIYR GT:EXON 1|1-224:0| SEG 28->49|klnnpnleknilkliklnidkk| SEG 197->208|kwkrksfkfykk| RP:PDB:NREP 1 RP:PDB:REP 91->195|1a0gB|6e-11|17.1|105/282| HM:PFM:NREP 1 HM:PFM:REP 11->212|PF01063|2.6e-23|21.6|199/232|Aminotran_4| RP:SCP:NREP 1 RP:SCP:REP 86->195|1et0A|2e-11|15.5|110/254|e.17.1.1| HM:SCP:REP 9->218|1daaA_|1.7e-21|18.7|209/277|e.17.1.1|1/1|D-aminoacid aminotransferase-like PLP-dependent enzymes| OP:NHOMO 1 OP:NHOMOORG 1 OP:PATTERN -------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 191 STR:RPRED 85.3 SQ:SECSTR ####cccccEEETHHHHHHHHHHHHHHTccccccHHHHHHHHHHHHHHTTcccEEEEEEEEEccccccccccTTccEEccEEEcccccccTTccccccHHHHHHHHHHHHTTccEEEEEETTEEEEcccEEEEEETTEEEEccTTccccHHHHHHHHHTTcEEcccccHHHHTTccEEEEEETTTEEEEEEEETT############################# PSIPRED cccccccccEEEEHHHHHHHHHHHHHHccccccccccEEEEEEEEcccccHHHHHHHHHHHHHHHHHHHHcccccccccEEEEEEEEcccccEEHHHHHHHHHHHHHHccccccEEEccccccccccccEEEEEEccEEEcccccHHHHHHHHHHHHHHHHHHHccccHHHcccccEEEEEccccccEEHHHHHHHHHHHHHHHHHHHHHHHHHccHHHccccc //