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Candidatus Pelagibacter ubique HTCC1062 (pubi0)
Gene : AAZ21660.1
DDBJ      :             D-galactarate dehydratase/Altronate
Swiss-Prot:             

Homologs  Archaea  11/68 : Bacteria  34/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
:94 amino acids
:PSIPRED
:DISOPRED
:RPS:PFM   50->89 PF08666 * SAF 1e-05 55.6 %
:HMM:PFM   44->90 PF08666 * SAF 2.9e-10 38.5 39/63  
:HMM:PFM   16->52 PF07478 * Dala_Dala_lig_C 0.00091 19.4 36/203  
:BLT:SWISS 39->91 UXAA_BACSU 5e-12 50.9 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ21660.1 GT:GENE AAZ21660.1 GT:PRODUCT D-galactarate dehydratase/Altronate GT:DATABASE GIB00256CH01 GT:ORG pubi0 GB:ACCESSION GIB00256CH01 GB:LOCATION complement(811791..812075) GB:FROM 811791 GB:TO 812075 GB:DIRECTION - GB:PRODUCT D-galactarate dehydratase/Altronate GB:PROTEIN_ID AAZ21660.1 GB:DB_XREF GI:71062657 LENGTH 94 SQ:AASEQ MATDIIIHDEKDNVGVVVIDKITPKQDCACWIMENDKTVQIQSVDEIQLGHKIAMVDLNEGDTILKYGHDIGKVVKSIKKGEHVHVHNVKTKKW GT:EXON 1|1-94:0| BL:SWS:NREP 1 BL:SWS:REP 39->91|UXAA_BACSU|5e-12|50.9|53/497| RP:PFM:NREP 1 RP:PFM:REP 50->89|PF08666|1e-05|55.6|36/67|SAF| HM:PFM:NREP 2 HM:PFM:REP 44->90|PF08666|2.9e-10|38.5|39/63|SAF| HM:PFM:REP 16->52|PF07478|0.00091|19.4|36/203|Dala_Dala_lig_C| OP:NHOMO 51 OP:NHOMOORG 45 OP:PATTERN ------1-11111111-2--------------------------------------------1----- --------------------------------------1-------------------------------------------1----------------------------------------------------------------------------------------------------------1-------------------1----1----11---------------------------------------------------------------------------------------------------------1------------1----------------22------1--1------------------------1----------------------1-1------------------1--1------------------------------------------------------1---------1------------------------121---------------121--------------------------11-1----2-----------------------------------------------------1-------------------------------------------------------------------------------------------------------------------------------------1------1----------------------------------------------------------------------------------------------------------------------------------1---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-2| PSIPRED ccccEEEEcccccEEEEEEcccccccEEEEEEEEccccEEEEEEcccccccEEEEEEccccccEEEcccEEEEEEcccccccEEEEEEcEEEcc //