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Candidatus Pelagibacter ubique HTCC1062 (pubi0)
Gene : AAZ21664.1
DDBJ      :             Glycine/D-amino acid oxidases deaminating
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  228/915 : Eukaryota  7/199 : Viruses  0/175   --->[See Alignment]
c.3.1
:434 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   22->70 2gjcB PDBj 2e-06 42.9 %
:RPS:PDB   13->58 2bc1A PDBj 6e-04 15.2 %
:RPS:PDB   30->386 1b3mA PDBj 4e-19 12.8 %
:RPS:SCOP  28->305 1ng3A1  c.3.1.2 * 5e-17 10.9 %
:HMM:SCOP  26->239 1el5A1 c.3.1.2 * 1.5e-28 25.3 %
:RPS:PFM   31->386 PF01266 * DAO 5e-06 24.7 %
:HMM:PFM   31->386 PF01266 * DAO 1.6e-45 21.8 340/358  
:BLT:SWISS 24->428 ORDL_HAEIN 2e-23 25.2 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ21664.1 GT:GENE AAZ21664.1 GT:PRODUCT Glycine/D-amino acid oxidases deaminating GT:DATABASE GIB00256CH01 GT:ORG pubi0 GB:ACCESSION GIB00256CH01 GB:LOCATION 816382..817686 GB:FROM 816382 GB:TO 817686 GB:DIRECTION + GB:PRODUCT Glycine/D-amino acid oxidases deaminating GB:PROTEIN_ID AAZ21664.1 GB:DB_XREF GI:71062661 LENGTH 434 SQ:AASEQ MRIVNDLGCSWISDLDRRSNIKNLDKDKSCDWLIVGAGYTGLSAARKLSELHPDQKIIVVDAQLAGEGASGRNSGYLVDTTLNDGFTSNKELSKYRKKTDIYKLGIDVVKKFIKEHQVDCDWNESGKYFASSNQKDRKILENFSKTLSKLNFGHNILEKDDLSKRLGTNFYNLALYTKGGVLLHPGKLVRAMIDTLPDNVELLENSQLNEWAKNTDRIICKFNKHQIITKKIIFCTNGFLKSLGVKKNYNFPLTLTASMTRPLTDREFKSIGEPREWGVLPIRPMGATIRMTKDKRILIRNTAEVHSPFKMSKTELDERSLTQKLGIKKRFPSLADNIIESSWSGVVSRTRNSSQIFEKVEDNVFVAGCYNGSGIGVGTLFGEQIAIKASNENSDEINIIESRTKPTWLPPQPFLNIGVKTRLMFERFRSRSDV GT:EXON 1|1-434:0| BL:SWS:NREP 1 BL:SWS:REP 24->428|ORDL_HAEIN|2e-23|25.2|385/431| BL:PDB:NREP 1 BL:PDB:REP 22->70|2gjcB|2e-06|42.9|49/299| RP:PDB:NREP 2 RP:PDB:REP 13->58|2bc1A|6e-04|15.2|46/473| RP:PDB:REP 30->386|1b3mA|4e-19|12.8|343/385| RP:PFM:NREP 1 RP:PFM:REP 31->386|PF01266|5e-06|24.7|328/354|DAO| HM:PFM:NREP 1 HM:PFM:REP 31->386|PF01266|1.6e-45|21.8|340/358|DAO| GO:PFM:NREP 1 GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF01266|IPR006076| RP:SCP:NREP 1 RP:SCP:REP 28->305|1ng3A1|5e-17|10.9|266/276|c.3.1.2| HM:SCP:REP 26->239|1el5A1|1.5e-28|25.3|198/0|c.3.1.2|1/1|FAD/NAD(P)-binding domain| OP:NHOMO 475 OP:NHOMOORG 235 OP:PATTERN -------------------------------------------------------------------- -1-11---------2------1---1------11111-121-----------1--1-----21----2122-------------------------------11-----------------------------------11----1------------------------------------------------------1-----1----------2-------------------------------------------------------------------------------------------------------------------------------------1----------------------------11111--212-----1--11111111116------3-1151-4663455456441------23223223---------11---1------------------------------2-1----212-2444442----22421111-1714-32---111--1---1-1-1-----------------------1---------------------------------------------------------11-1--41---3322323344334433344--------------1-1---111-1---11-11111--1111-111111-2221111-11-111--1111111121111111-----------------1------------34----11-111-1--1213-2-1-1-1166576775375551334--------------------11--11----------------------------------------------------------------------- --------------------------------------------------2-12------------------------------------------1-1----------------------------------------------------------------1-------------1--------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 423 STR:RPRED 97.5 SQ:SECSTR ########ccccccTTHHHHHHHHHTcTTEEEEEEcccHHHHHHHHHHHHTTcTccEEEEcccccccccccccccGGcccEEEEccccTTcTTHHHHHHHHHHHHHHHHHHHHHHHHcccccEEcccEEEEEETTccHHHHHHHHHHHHHTcccEEEETHHHHHHccccTTEEEEEETTcEEEEHHHHHHHHHHHHHHTcEEEccccEEEEcccTTcEEEEETTEEEEEEEEEEccGGGHHHHGGGGTEEcccEEEEEEEEcccHHHHcGGGTccEEEEEETTEEEEEEcccTTccEEEcccEEccTTTccccTTccTHHHHHHHHHHHHcGGGGcccEEEEEEEEEEEcTTcccEEEEEEEEEEEEEccTTccGHHHHHHHHHHHHcccccccGHHcccGGGGTTccTTccTTcccTTcccEGGGcccGc### DISOP:02AL 1-4| PSIPRED ccccccccccccccccccccccccccccEEEEEEEcccHHHHHHHHHHHHHccccEEEEEcccccccccccccccEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEccEEEEEccHHHHHHHHHHHHHHHHccccEEEEcHHHHHHHHccccEEEEEEEccccEEcHHHHHHHHHHHHHcccEEEEccEEEEEEEcccEEEEEccccEEEEEEEEEEccHHHHHHHHHcccEEEEEEEEEEEEcccHHHHHHHccccccEEEEccccEEEEEEcccccEEEccccccccccccccccHHHHHHHHHHHHHHHccccccccEEEEEEEcccccccccEEEEEccccEEEEEEccHHHHHHHHHHHHHHHHHHHccccccccHHHHccccccccHHHHHHHHHHHHHHHHHHHHHccc //