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Candidatus Pelagibacter ubique HTCC1062 (pubi0)
Gene : AAZ21665.1
DDBJ      :             Predicted ABC-type transport system protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  213/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
:842 amino acids
:PSIPRED
:DISOPRED
:HMM:PFM   213->375 PF02687 * FtsX 5.6e-16 17.8 163/175  
:HMM:PFM   689->826 PF02687 * FtsX 1.4e-08 16.7 138/175  
:BLT:SWISS 47->263,509->759 YBBP_ECOLI 3e-10 20.5 %
:BLT:SWISS 263->341 MACB2_YERPN 4e-04 24.1 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ21665.1 GT:GENE AAZ21665.1 GT:PRODUCT Predicted ABC-type transport system protein GT:DATABASE GIB00256CH01 GT:ORG pubi0 GB:ACCESSION GIB00256CH01 GB:LOCATION complement(817687..820215) GB:FROM 817687 GB:TO 820215 GB:DIRECTION - GB:PRODUCT Predicted ABC-type transport system protein GB:NOTE permease involved in lysophospholipase L1 biosynthesis GB:PROTEIN_ID AAZ21665.1 GB:DB_XREF GI:71062662 LENGTH 842 SQ:AASEQ MSKLSEYKLTLIYALRDLSRNYKKISSIILTLFISLFILSSIFTIEDSLNKELNNNSRALLGGDIEIDYNRNVGNLELINQVKEFATVSQMVEFSTMISTTNQSKNKSIFSRIKTVDQNYPLFGKVGYEPSGAFEKLQTIENTILVNENIFKNLNLKINDKIKVQDQLFTVIGIVKSVPDIGGAFVFGDFALAGKQTLELLKLNNLGSFLNYEYKVKFNEGDNPNTLSKKIEQLFKNEKKVRIRYHEKSDGPLKRIIDNFSQFLSLVSISAMLIAGIGIANTLLSFINQNNMSIAVKKSLGFFSKDIKIVYYLQLLILLFIISTAAYSFSFFLVPIVDVYLSAGLGLNIEGSFSILNYFKVFLVGLLVLIIFSIPTINAIDQVKASNLFRNVFQNLQFYYSKKSILLSLLLLSILISLFTIGSARPVYSLGYFGAFFVCLLVFYLLSNLIIKLFKGLKEHPNISIKVSVKNITQTKSITPITIMSLGLGVTLLLTLAFVGSNFKREIAKSIPELAPDYFFIGIQSDERQIFEDLIFDMDKEANLEIVPMVSTGIVKINGIDPNTYIDSSNDSHWVIRNDRRSSWADKVLKDNPIVEGKWWDLDRPDKLQISLDSKIAKDFDIKIGDIFTLNIYGREIEGEIVNFRLVDYRDFSINFAMLLNPQFAKNIPHEYLATSKFKSLENFNETALLDKMPSLSIIKITDYLEKVTDLLNKVFIAVTVISAITIVIGLIVISSAIIVQGKIKEFQNLIFKILGFSKVEVILSSIIEFFIIFTSIILIALFFAIIGSQFIIENIFQITWKFDLAIFLQVTIGIGLATLILIMITNFKYLSPKVYPLIRNQ GT:EXON 1|1-842:0| BL:SWS:NREP 2 BL:SWS:REP 47->263,509->759|YBBP_ECOLI|3e-10|20.5|440/804| BL:SWS:REP 263->341|MACB2_YERPN|4e-04|24.1|79/649| TM:NTM 10 TM:REGION 25->47| TM:REGION 262->284| TM:REGION 317->339| TM:REGION 357->379| TM:REGION 404->426| TM:REGION 433->455| TM:REGION 479->501| TM:REGION 708->730| TM:REGION 763->785| TM:REGION 810->832| SEG 25->45|issiiltlfislfilssifti| SEG 149->163|nifknlnlkindkik| SEG 307->322|ikivyylqllillfii| SEG 359->374|fkvflvgllvliifsi| SEG 404->418|sillsllllsilisl| SEG 486->496|lglgvtllltl| SEG 715->729|vfiavtvisaitivi| SEG 763->787|ilssiieffiiftsiilialffaii| SEG 812->826|tigiglatlilimit| HM:PFM:NREP 2 HM:PFM:REP 213->375|PF02687|5.6e-16|17.8|163/175|FtsX| HM:PFM:REP 689->826|PF02687|1.4e-08|16.7|138/175|FtsX| OP:NHOMO 213 OP:NHOMOORG 213 OP:PATTERN -------------------------------------------------------------------- 1------------------------------------------------------------------------------------------------------11----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1--111------111111111111111111111111-11111111111-11111111111111---11-1111111---------11--111-----------------------------11111-111111111111-11111111111111111-11-111111-11-1-11-11--1111--------1111111-----11-1---1-1-------------------------------------------11-1-111111-------1------1--1----1111------1-11--1------------------------------1-111111--------1--------------------------------1---------11111----------------------11-1111111111111111111---------11111111111111111----------------111111------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-4, 101-104, 133-137, 240-259, 565-573, 841-842| PSIPRED cccccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccEEEEEcccccHHHHHHHHHHccHHEEEEEEEEEEEcccccccccEEEEEEEEccccccEEEEEEcccccHHHcccccccEEEcHHHHHHcccccccEEEEccEEEEEEEEEEEccccccccccccEEEEEHHHHHHcccccccccEEEEEEEEccccccHHHHHHHHHHHcccccccEEccHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccEEEEcccHHHHHHHHHHHHHccccccccEEEEEccEEEEEcccccccccccccccHHHHHHHcccccccccccccEEEcccccccccccccEEEEEHHHHHHcccccccEEEEEEccEEEEEEEEEEEEEEEccccEEEEEEEcHHHHHHccHHHEEEEEcccccHHHHHHHHHHcccEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccc //