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Candidatus Pelagibacter ubique HTCC1062 (pubi0)
Gene : AAZ21767.1
DDBJ      :             unknown protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  1/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.102.3
:385 amino acids
:PSIPRED
:DISOPRED
:HMM:SCOP  89->330 1qazA_ a.102.3.1 * 4.5e-17 22.1 %
:HMM:PFM   174->205 PF08073 * CHDNT 0.00048 36.7 30/55  
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ21767.1 GT:GENE AAZ21767.1 GT:PRODUCT unknown protein GT:DATABASE GIB00256CH01 GT:ORG pubi0 GB:ACCESSION GIB00256CH01 GB:LOCATION 941232..942389 GB:FROM 941232 GB:TO 942389 GB:DIRECTION + GB:PRODUCT unknown protein GB:PROTEIN_ID AAZ21767.1 GB:DB_XREF GI:71062764 LENGTH 385 SQ:AASEQ MKSLLKVFLLFILLSGNAFAKVKSKDINFPGKYYTKEIKTCSAIPKDKSFSNKSTIDTVNSVVGFDWSAYHEKYSNSILVEHAAITKPIKVMIAGTHMAIGDKNQTNINIAKGLLLEIAKANTLYNSISYEELKKKGKCWKDNNPKAPCWYHEYEFAGQWFGNYMISAVMLKSELNKEEFKIVNNYIKKMYKKFLKPIQFKKNDKGFYAMANGGLSTLVYASWTEDKKLAAKEINHTLKQIDKLFYDDGYINDNSFRGLRGQWYHSYGVDIALGYIYIAELWGANVPKNIHEKLFNSVKVVNLAITDPEKFLERKNPNGLARNRITDPKKATPHTHQMAIAIDTLMEIVTGIKLEHDPIYLRKRKMHTPDGIDDLIGFNPNCIIR GT:EXON 1|1-385:0| TM:NTM 1 TM:REGION 1->21| SEG 2->15|ksllkvfllfills| HM:PFM:NREP 1 HM:PFM:REP 174->205|PF08073|0.00048|36.7|30/55|CHDNT| HM:SCP:REP 89->330|1qazA_|4.5e-17|22.1|217/0|a.102.3.1|1/1|Chondroitin AC/alginate lyase| OP:NHOMO 1 OP:NHOMOORG 1 OP:PATTERN -------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-2| PSIPRED cHHHHHHHHHHHHHccccEEEEEccccccccHHHHHHHHHHHccccccccccccHHHHHHHHHcccHHHHHHHHcccEEEEHHHHcccEEEEEEEcEEEEcccccccHHHHHHHHHHHHHHHHHHHcccHHHHHHcccccccccccccEEEEHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHccccccccEEEEEccccEEEEEEEccccHHHHHHHHHHHHHHHHHHHHccccccccccccccccEEEcccHHHHHHHHHHHHHHcccccHHHHHHHHccEEEEEEEEccHHHHHHcccccccHHccccccccccccHHHHHHHHHHHHHHHHccccccccEEEEcccccccccHHHHHcccccEEEc //