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Candidatus Pelagibacter ubique HTCC1062 (pubi0)
Gene : AAZ21823.1
DDBJ      :             unknown
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  1/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.66.1
:224 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   40->206 3egiA PDBj 9e-05 7.3 %
:RPS:SCOP  40->144 1zq9A1  c.66.1.24 * 1e-04 14.3 %
:HMM:SCOP  40->157 1o54A_ c.66.1.13 * 0.00077 19.6 %
:BLT:SWISS 30->118 HFLK_BUCAP 3e-04 37.0 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ21823.1 GT:GENE AAZ21823.1 GT:PRODUCT unknown GT:DATABASE GIB00256CH01 GT:ORG pubi0 GB:ACCESSION GIB00256CH01 GB:LOCATION 995434..996108 GB:FROM 995434 GB:TO 996108 GB:DIRECTION + GB:PRODUCT unknown GB:PROTEIN_ID AAZ21823.1 GB:DB_XREF GI:71062820 LENGTH 224 SQ:AASEQ MSFFLEIKSNTVKCPNGCKLFNDKRNFSYWESKNVTKDEKYIVDYLNINSEVLKNKNILHVGIGNSYIAKKLLSYNKIDGISLSQNELDYASKLNLSNYNFFFQNKYANQKLFDDKLNFYNIIIDINLKSFSCCEVAFDEMFKMYVKIINKDGKIITSRTGLEWSRIIKPVLSFSFKNFLYKRLKEFDGPESNILSIQNCEEISKKFNLDIDLSDQNLVIFTKK GT:EXON 1|1-224:0| BL:SWS:NREP 1 BL:SWS:REP 30->118|HFLK_BUCAP|3e-04|37.0|81/411| RP:PDB:NREP 1 RP:PDB:REP 40->206|3egiA|9e-05|7.3|164/192| RP:SCP:NREP 1 RP:SCP:REP 40->144|1zq9A1|1e-04|14.3|105/278|c.66.1.24| HM:SCP:REP 40->157|1o54A_|0.00077|19.6|102/0|c.66.1.13|1/1|S-adenosyl-L-methionine-dependent methyltransferases| OP:NHOMO 1 OP:NHOMOORG 1 OP:PATTERN -------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 187 STR:RPRED 83.5 SQ:SECSTR ###################ccGGGccccccccccccccHHHHHHHHHHHHHcTTccEEEETTcTTcHHHHHHHHTTEEEEEEccHHHHHHHHHHHHHHcGGGEEEEEccHHHHGGGccccEEEEcccTTcccccccccTTTcccHHHHHHHHHTTcccEEEEEETTccHHHHHHTTcTTccEEEEEEEETTEEEEEEEEcGGGccc################## DISOP:02AL 53-53,73-73,76-76,109-109,115-116,118-118,123-123,171-171,179-179,216-216| PSIPRED ccEEEEEcccEEEcccccEEccccccccHHHccccccccEEEEEEEEccHHHHccccEEEEEcccHHHHHHHHcccccccEEEcHHHccHHHcccccccEEEEEcccccccHHcccccEEEEEEEEEcccccHHHHHHHHHHHHHHHHHcccccEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEccHHHHHHHcccEEEEcccEEEEEEcc //