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Candidatus Pelagibacter ubique HTCC1062 (pubi0)
Gene : AAZ21829.1
DDBJ      :             Permeases of the drug/metabolite transporter (DMT) superfamily
Swiss-Prot:             

Homologs  Archaea  3/68 : Bacteria  286/915 : Eukaryota  8/199 : Viruses  0/175   --->[See Alignment]
f.39.1
:270 amino acids
:PSIPRED
:DISOPRED
:RPS:SCOP  27->125 1s7bA  f.39.1.1 * 5e-08 10.1 %
:HMM:SCOP  26->130 1s7bA_ f.39.1.1 * 2.2e-13 17.1 %
:HMM:SCOP  165->269 1s7bA_ f.39.1.1 * 9.1e-12 15.2 %
:HMM:PFM   8->122 PF00892 * EamA 9.4e-16 21.7 115/126  
:HMM:PFM   141->261 PF00892 * EamA 7.7e-14 18.3 120/126  
:HMM:PFM   97->174 PF06695 * Sm_multidrug_ex 0.00046 14.1 78/121  
:BLT:SWISS 4->260 SAM_RICTY 1e-21 21.5 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ21829.1 GT:GENE AAZ21829.1 GT:PRODUCT Permeases of the drug/metabolite transporter (DMT) superfamily GT:DATABASE GIB00256CH01 GT:ORG pubi0 GB:ACCESSION GIB00256CH01 GB:LOCATION complement(1000426..1001238) GB:FROM 1000426 GB:TO 1001238 GB:DIRECTION - GB:PRODUCT Permeases of the drug/metabolite transporter (DMT) superfamily GB:PROTEIN_ID AAZ21829.1 GB:DB_XREF GI:71062826 LENGTH 270 SQ:AASEQ MLPIMDGFAKYLSADMPVLQITWARYFFTVAFTLPIMFLFYNKQLVWTDKPKLQIIRGLILLSANICFFYAISVISLAKALTLAFVAPLIVTAFSPIFLGEKVGIRRWTAVIIGFIGSLVVIRPGFVEINLASLAALGTGVMYGFYLIITRKLSTSDNPLLTLLLTGLVGLIAVSGLMPFVWVNPTPSQWSMMASIGVFACIGHLFLILSLKYADASKLAPFSYFEIITNIIIGYYFFSDFPDNWTFLGLSIIIMSGVYISRRESYIKSY GT:EXON 1|1-270:0| BL:SWS:NREP 1 BL:SWS:REP 4->260|SAM_RICTY|1e-21|21.5|256/294| TM:NTM 7 TM:REGION 24->45| TM:REGION 66->88| TM:REGION 118->140| TM:REGION 161->183| TM:REGION 193->215| TM:REGION 219->239| TM:REGION 245->261| SEG 160->171|lltllltglvgl| HM:PFM:NREP 3 HM:PFM:REP 8->122|PF00892|9.4e-16|21.7|115/126|EamA| HM:PFM:REP 141->261|PF00892|7.7e-14|18.3|120/126|EamA| HM:PFM:REP 97->174|PF06695|0.00046|14.1|78/121|Sm_multidrug_ex| RP:SCP:NREP 1 RP:SCP:REP 27->125|1s7bA|5e-08|10.1|99/106|f.39.1.1| HM:SCP:REP 26->130|1s7bA_|2.2e-13|17.1|105/106|f.39.1.1|1/2|Multidrug resistance efflux transporter EmrE| HM:SCP:REP 165->269|1s7bA_|9.1e-12|15.2|105/106|f.39.1.1|2/2|Multidrug resistance efflux transporter EmrE| OP:NHOMO 592 OP:NHOMOORG 297 OP:PATTERN --------------------------------------1-11-------------------------- ---------------------------------111------------------------------------------------------------2---------1-----------------------1----1-11--------1-----11---11--1--------111-11-11-111-------------------------------------------------11111111-11111111111-----------------------------------------------------------------------11-1--------------2222-1--1--------------------1----1--2-----11333---2233233333332335-1111111138--6887665786662121-7C97886ADD11111111---1-142---------11211111111111111-2-31212124313-------------11------1--111--1--11-111-12221----2-11-----------11-----1----------------------------1--1-------------1-1--11--21--1-31--123333-212221-2121------------------1------------------------------------1-------------------------------11111111111----11111-----1311111--------1---2212111--23-33331211111111211----------2332222224334422222222221111--1------------------------------------------------------1- -----1--------------------------------------------------------1-----------------------------------------------1-----------------------------------1-------------------------------1-111---------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 268-270| PSIPRED cccHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHccc //