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Candidatus Pelagibacter ubique HTCC1062 (pubi0)
Gene : AAZ21830.1
DDBJ      :             conserved hypothetical protein
Swiss-Prot:             

Homologs  Archaea  9/68 : Bacteria  63/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
:300 amino acids
:PSIPRED
:DISOPRED
:RPS:PFM   36->290 PF03547 * Mem_trans 8e-06 23.9 %
:HMM:PFM   8->145 PF03547 * Mem_trans 4.1e-11 19.6 138/385  
:HMM:PFM   154->291 PF03547 * Mem_trans 7.3e-17 20.6 136/385  
:BLT:SWISS 101->288 Y1031_METJA 6e-16 28.5 %
:PROS 153->159|PS00092|N6_MTASE
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ21830.1 GT:GENE AAZ21830.1 GT:PRODUCT conserved hypothetical protein GT:DATABASE GIB00256CH01 GT:ORG pubi0 GB:ACCESSION GIB00256CH01 GB:LOCATION complement(1001292..1002194) GB:FROM 1001292 GB:TO 1002194 GB:DIRECTION - GB:PRODUCT conserved hypothetical protein GB:NOTE similar to Pseudomonas aeruginosa PA01 pir||A83623 GB:PROTEIN_ID AAZ21830.1 GB:DB_XREF GI:71062827 LENGTH 300 SQ:AASEQ MEIYLKLFEVLFPVFFVVGIGYYLGKNNPKLDTSFITTFAANIGTPAMIIYSLTSTGMSFDIFKNYFWYYLIAIFIFTIVGIVFLFFLNTKDIIRELPPFVMPNTGNMGLPICLFAYGTQGLGIAAAISALIVLCHFTLGVFLADRKFDISVILKNPPFYAIIISVIFLYFRIELPLFVENTTFLLMYATIFLILMSLGIALTRFKIFSFKKAFISSIGRVILGPIIGFSIIKYFNLSGFAAGVLLIQCSMPSAVLNYLVASIYSPKKIVDSVASTIVVSTVMSFFTIPVVVFFALKYFN GT:EXON 1|1-300:0| BL:SWS:NREP 1 BL:SWS:REP 101->288|Y1031_METJA|6e-16|28.5|186/308| PROS 153->159|PS00092|N6_MTASE|PDOC00087| TM:NTM 9 TM:REGION 3->25| TM:REGION 32->54| TM:REGION 72->94| TM:REGION 115->137| TM:REGION 157->179| TM:REGION 183->204| TM:REGION 213->235| TM:REGION 239->261| TM:REGION 273->295| SEG 5->18|lklfevlfpvffvv| SEG 121->132|glgiaaaisali| SEG 205->218|fkifsfkkafissi| RP:PFM:NREP 1 RP:PFM:REP 36->290|PF03547|8e-06|23.9|251/305|Mem_trans| HM:PFM:NREP 2 HM:PFM:REP 8->145|PF03547|4.1e-11|19.6|138/385|Mem_trans| HM:PFM:REP 154->291|PF03547|7.3e-17|20.6|136/385|Mem_trans| GO:PFM:NREP 2 GO:PFM GO:0016021|"GO:integral to membrane"|PF03547|IPR004776| GO:PFM GO:0055085|"GO:transmembrane transport"|PF03547|IPR004776| OP:NHOMO 76 OP:NHOMOORG 72 OP:PATTERN ----------------------------1----1-11111-11------------------------- -----------------------------------------------------------------------------------1----------------------------------------------------1----------11-111-----------------1------------------1----11111--1----1---1----1-1-----------------------------------------------------1--1-----------1-------------------------------------1-----------1-------------------------------1----------------------------------------------------------------------11-----1-1-------------1-1-----------------------------1----------------------------------1111----------------11------1----------1-1------------------1-------------1--------------------------1---1-----------------------------1-1---------------------------------------------------------------------------------------------------------12-------------------------112112-----1111-------------------------111--------------------------------------------------------------------2---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 300-301| PSIPRED cHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHccHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHccHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc //